Gene Caul_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0577 
Symbol 
ID5898032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp628301 
End bp629041 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID641561059 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001682208 
Protein GI167644545 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATT TCACGGGCCT GGTATCTGTC GTGACCGGCG CAGGAAGCGG CATCGGCCGC 
GAGACGGCGC GTTACTTTCA CGCCTGCGGC GCCGTCGTCG TGTTGGCGGA CATCGACGAG
GCGGCGGCGA AGACTGCGGC CTTGGAGCTT GATCCCGACG GTAGGCGCGC GGTGGCCGTG
CGTTACGACG CCGGCCAGCC CGGCGACGCC GGTATGCTTG TTGAGCACGC CATGGCGCTC
TTTGGTCGCC TCGACCATGT CGTCGCGAAT GCGGGGATCT ATACAGATGA GCCCGCCGCC
CTGATGAGCG ATCAGGCGTG GCGGCGTACG ATGCAGATCA ACCTCGACGG CGTCTTCTAT
CTGTGTCGCG AGGCTAACCG GGTCATGACC GAGGGCGGCG CCATCGTCGC CGCTGCATCG
GCGGCCGCGC ACATGGGGGG CAGTCTTGGT CACGCGCATT ATGGCGCCTC CAAGGGCGGC
GTGCTCGCGC TCGTGCGCGG CCTAGCGCGT GAGTTCGGAC CGCGTCTTCG GGTCAATGCG
GTTTCGCCCG GAACGATCGA TACGCCGATG GTGGCGAGCA ACAGAAGGCT TCTAAATCCA
GACGTCATCG CATCATTTGC ATTGGGTCGG ATGGGCAGGC CTGAAGAGGT CGCCTCGGTC
ATCGCTTTCC TCTGCAGCAA TGCGGCCAGC TACGTCACGG GCGAGACGAT CCTGGTGTGC
GGCGGCAGTT ACATGGGATG A
 
Protein sequence
MFDFTGLVSV VTGAGSGIGR ETARYFHACG AVVVLADIDE AAAKTAALEL DPDGRRAVAV 
RYDAGQPGDA GMLVEHAMAL FGRLDHVVAN AGIYTDEPAA LMSDQAWRRT MQINLDGVFY
LCREANRVMT EGGAIVAAAS AAAHMGGSLG HAHYGASKGG VLALVRGLAR EFGPRLRVNA
VSPGTIDTPM VASNRRLLNP DVIASFALGR MGRPEEVASV IAFLCSNAAS YVTGETILVC
GGSYMG