Gene Caul_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0571 
Symbol 
ID5898026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp620098 
End bp621318 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID641561053 
Productbeta-lactamase 
Protein accessionYP_001682202 
Protein GI167644539 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTG TTGACGTGAC CAGTATTCAC GGATTTTGCG ACGACACCTT CAAAGAGGTG 
CGTGACGAAT TCAACGCGAA CTTCAAACAT CGCGGAGAAC TCGGCGCGAG CCTTGCCATC
TATCTTGACG GAAAACTTGT GGTCGATCTG TGGGGCGGCG TTGCCGACAC CGCCACAGGT
CGACCGTGGG AGGAGCACAC GATGGCGGTC GTGTTCTCCT GCACGAAGGG CATGGCGGCC
ACCTGCATGC ATATGCTGGC CGAACGCGGT CTGCTCGACT TCAACGCGCC GATGGCGACC
TACTGGCCGG AGTTCGCCGC GAACGGCAAG GAAGGCATTA CGGTCGCGAT GGCGCTCAGC
CATCAGGCGG GCGTGCCGTT GTACCAGGCG GACCTGCCGG CGGGCGCCTT TCAAGACTTC
GACCTGCTCG CCAGTCGGCT GGCCGCCGAG GCGCCGGTTT GGGAGCCTGG GACGGCGCAC
GGCTATCACG CGATCACCAT TGGCGTGATC GAAGGCGAAC TGATGCGCCG GATAACCGGG
CGCACCATCG GCGCCTTCCT GCGCGACGAA GTGGCCCGGC CCTTGGGAGC AGATATCTGG
ATCGGACTGC CCGACAGCGA GGAGCACCGG GTCGCGACCC TATACCTGAG CGAGCGCGAT
CCGCGATCGC CCATGCAACA AAAGTTGACC GGCGATCCGC ACTGGATTGG CCGGAAGCTC
GCGTCCAACA GCGGCGATGA CCTGAACTAC GTCAATGCGA GGGTTCGCCG TGCTGTCGAG
ATACCTGCGG CCGGTGGGGT CGCCAGCGCG CGGGGTCTCG CTCGCCTCTA TGCGCCCCTG
TCACGCGACG GCGCGGTCGA TGATGTGCGG TTGGTGCAAT CGTCGTCGCT CTACGCGATG
CGCGAGATCC GCTCGGCTTC CGACTGTGAC GTGATCCTCC GCATACCCAC GACATTCACC
CTTGGCTTCT CGAAATCTTG GGGAGACAGG GGGCTGGGCA CGGGCCAGCA CGTCATCCTG
GGCAAGGAGG CGTTCGGTAC GCCCGGCCTG GGCGGCAGCG TCGGCTTCGC CGACACCCAG
GCCCGCATGT CGTTCGGCTA CGTCATGAAC CGGCACGGCA GCGGAGTCGG CGTCAACGAA
CGCGGACAGT CGCTGATCGA TGCGGCCTAC CGGTCGCTAG GATTTACCAC GAGCACGCCA
GGCTACTGGG TGCGCGACTG A
 
Protein sequence
MTSVDVTSIH GFCDDTFKEV RDEFNANFKH RGELGASLAI YLDGKLVVDL WGGVADTATG 
RPWEEHTMAV VFSCTKGMAA TCMHMLAERG LLDFNAPMAT YWPEFAANGK EGITVAMALS
HQAGVPLYQA DLPAGAFQDF DLLASRLAAE APVWEPGTAH GYHAITIGVI EGELMRRITG
RTIGAFLRDE VARPLGADIW IGLPDSEEHR VATLYLSERD PRSPMQQKLT GDPHWIGRKL
ASNSGDDLNY VNARVRRAVE IPAAGGVASA RGLARLYAPL SRDGAVDDVR LVQSSSLYAM
REIRSASDCD VILRIPTTFT LGFSKSWGDR GLGTGQHVIL GKEAFGTPGL GGSVGFADTQ
ARMSFGYVMN RHGSGVGVNE RGQSLIDAAY RSLGFTTSTP GYWVRD