Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0563 |
Symbol | |
ID | 5898018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 611271 |
End bp | 613484 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641561045 |
Product | TonB-dependent receptor |
Protein accession | YP_001682194 |
Protein GI | 167644531 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.354996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAATC GGTCGAATAC TCGTAAATTC TTGCTTTCCA ATGCGGCTCT GGCCGCCATG CTCTACGCGA CGTCTGCAGG AGCGCAGACG TCGCCCGAGG CAGGCGGCGC TTTCGTCGAG GAGGTGATCG TCACGGCGGC CAAGCGCTCG GAAAACCTCC AGTCGGTCCC GATCTCTGTC TCCGCGATCA CTGGCGATTC ACTGGCCAAG TCCCGCATCG ACAGCGTCGA TGCGCTGGTC AGCAGGATTC CCAACCTCCA GCTGAGCTCG ACTGTGGGCG CCAACACCCC GATCTTCGCG GTTCGCGGCG TCTCGATGTC GGACTACTCG CTCAGCCAGG CGAGCCCGGT CGCGACCTAT TATGACGAGG TCTACAAGGG CAACTTCGCC TTGCTCGGCG TGGCGATGTA CGACCTCGAG CGTGTTGAAG TGCTGCGGGG CCCCCAGGGG ACGCTCTATG GCAAGAACAC GACTGGCGGC GCAGTCAATC TCATCAGCCG CGACGCCAAG CTGGGCGAGA CCAGCGGCTA CGTTAGTGCA GGGTATGGCA ACTACAACCG CGTCGATCTG AACGGCGCCG TCAACCTGCC GCTAGGGGAG GACGCCGCTC TGCGGTTAGC CGGCACCTAT AGCCGCGCGG ACGGCTGGTT CGAGAGCGTG ACCCCTGGCA TCCGGGACCT CAACGAAGTT CGCGAATACG GCGTGCGCGC GACCCTCAAC TACGAGCCGG CCGACGGCGT CCACCTGAAG CTTGTTGGGT CGACAAGCCT CCAAAACCCG CAGAACTACG GGATCTACGC GACCCCGGAA GCGACCAATC GGCCCGGGCT CGACACTTGG GAAGTCGCCT CGAACATTCC CGATCGCCGC CGGGCGCGGA CTTGGTCCCT TGCGCTCCAC GCCGACGTCG ACGTTTCCGA CACCCTGACT TTGACGAGCA TCACCTCCTG GGACAAAGGA ACGCTTCACT TCGTAGAGGA CACCGACGGG AAAGCGACCA GTGAGCTGGA AATCACCTAC GGCGATCGGG CCAGTCAGTT CGCTCAGGAT CTGCGCCTGA CCAGCGACAC CGGCGGTCCG TTCAACTTTA TCCTCGGGGC CTATTTCAAT CGTGAGAAAG TGTTCAACAA CAACGTCCAG AAAATGATGA ACGAGCTCGA CGTCAACGGT GACGGCGTCA TCGATTACAA CGACTGCATC GACAGTGGTT TTGTCGCAGC TTGCCAGCTC ACGAACCAGT TCTATCAAAC CAAGAAAAGC TACGCGCTTT ACACCGACGT GAAGTATGAG CTCGATGAGA ATCTGACGCT TCGCGGCGGA CTGCGCTACA CCCGCGACGA AGGCGAGCAG GCCGACTACC AGTCCGACGC TTATGGCGCC GACGGCGTCC TGATCACGAA CCTCATCCCG CCGACGAACC TTGAGTACTC GGCCAAAAAC CTGTCGGGCA AGATCGGGGT CGACTATAAG CTGTCGTCGA ACAAGATGGT CTACGCGACC ATCAGCACCG GCTATCGTGC GCCGAGCTTC AACGCACAGG CTTTCTTCGA CCCCAGCGAA ATCACTGTAG CCAAGGCCGA GAAGGTCACT TCGTACGAGG TGGGTGCGAA GACGCAGTTC GCCGATCGCC GAGTGACGCT GAACATGGCC GCCTTCTACT ACGACTATCG CAATCAGCAG TTTCTGAACA TCGACGCGGC CACCGCGCGC CAACAGCTAC TCAACATCCC GAAGTCTCGC ATCTATGGCG GCGAGGCGGA ACTGTCGGCA TACGTGAACG AGAGCTTCAG CCTGCGCGCC GGCCTGGGCC TGCTATCGAC CGAAATCCGA GAAGGTACGG TCAGCGGCGT CGATGTCAGC GGCAACAAGC TGTCCAATGC GCCAGAAGTC TCGGCCAATC TGGGGCTCGA CCTCACCATC TTCGAAAACG AGAATGGCAA GCTCTCGCTA CACCCGGAAG TGGCCTATCA ATCGAGCCAG TACTTCGAAG TGATCAACAT TCCGAGGCTC AGGCAGGACG GCTACGCGCT ACTGTCGGGA CACATCAGCT ATGAGACAAC GGATGGTCGC TGGAACGCCT CGGCGTGGAT CAAGAACGCC GCCAATGAGA AATACTTCAC GTCGCGCATC GATCTGCTCA ACAACTGGGG CTTCGATTAC AACCAGCTCG GCACACCGAG AACGTATGGG ATCTCTATAG GAGCCAAATT CTAG
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Protein sequence | MYNRSNTRKF LLSNAALAAM LYATSAGAQT SPEAGGAFVE EVIVTAAKRS ENLQSVPISV SAITGDSLAK SRIDSVDALV SRIPNLQLSS TVGANTPIFA VRGVSMSDYS LSQASPVATY YDEVYKGNFA LLGVAMYDLE RVEVLRGPQG TLYGKNTTGG AVNLISRDAK LGETSGYVSA GYGNYNRVDL NGAVNLPLGE DAALRLAGTY SRADGWFESV TPGIRDLNEV REYGVRATLN YEPADGVHLK LVGSTSLQNP QNYGIYATPE ATNRPGLDTW EVASNIPDRR RARTWSLALH ADVDVSDTLT LTSITSWDKG TLHFVEDTDG KATSELEITY GDRASQFAQD LRLTSDTGGP FNFILGAYFN REKVFNNNVQ KMMNELDVNG DGVIDYNDCI DSGFVAACQL TNQFYQTKKS YALYTDVKYE LDENLTLRGG LRYTRDEGEQ ADYQSDAYGA DGVLITNLIP PTNLEYSAKN LSGKIGVDYK LSSNKMVYAT ISTGYRAPSF NAQAFFDPSE ITVAKAEKVT SYEVGAKTQF ADRRVTLNMA AFYYDYRNQQ FLNIDAATAR QQLLNIPKSR IYGGEAELSA YVNESFSLRA GLGLLSTEIR EGTVSGVDVS GNKLSNAPEV SANLGLDLTI FENENGKLSL HPEVAYQSSQ YFEVINIPRL RQDGYALLSG HISYETTDGR WNASAWIKNA ANEKYFTSRI DLLNNWGFDY NQLGTPRTYG ISIGAKF
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