Gene Caul_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0550 
Symbol 
ID5898005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp599423 
End bp600112 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content61% 
IMG OID641561033 
ProductTetR family transcriptional regulator 
Protein accessionYP_001682182 
Protein GI167644519 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.345828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACTAA GTCAATTTAT GTACTCAGTA CAATTTAATG GCCTGGAGCT CATGTCAACG 
GTTTCCGATC GGCGGACGCG CAAACGCCTG GCGACACGTC AGAGCATCTC GGACGCTGCG
ACGCGGCTAT TTAGTGAGCG TGGGTTCGAT CGGGTCACGG TGGACGAGAT CGCCAAGGAA
GCCGATGTCG GACGAATGAC GGTCTTCAAT CACTTCGCGC GGAAGGAGGA TATGTTCTTC
GACCTTGACG GGGCGGCACG CGAGGATCTG CGCAGCGCAC TACGCGCGTC GGACCCGAGC
CTTGGCGTCA TCGAGGCGCT ACGGCTTTTC GCGCACCGTA TCGTGGCCGA ACAGCGTCCC
TATGCTCGCT TCTTCGAGGG CAGTCGAAAG TTCATGGAAA CGATCGCCGC CAGCGAAACC
CTGAAGGCGC GCGCCAGGGC GATACGGGAC GAACTCACCA GCATCGTACA GGAGGGGGTG
GCGCTTGCCG CAGGGCGGGA CCAAGACGAT CCCGACGCCC ATCTGGCCGC GAGTCTCCTG
GTTGCGACGT GGGCGGCGGG GTTCATCCAG GCGCATCGAG CGTACCAGCA GAATCAGGAT
GGCCAGGAGG CGCAGCGAGT CTTTTTAGAC GTCATCGACC GTGGGACGCA TGGCGTCAGG
ACAACGATGG CTGACACGCC TTTCATATGA
 
Protein sequence
MILSQFMYSV QFNGLELMST VSDRRTRKRL ATRQSISDAA TRLFSERGFD RVTVDEIAKE 
ADVGRMTVFN HFARKEDMFF DLDGAAREDL RSALRASDPS LGVIEALRLF AHRIVAEQRP
YARFFEGSRK FMETIAASET LKARARAIRD ELTSIVQEGV ALAAGRDQDD PDAHLAASLL
VATWAAGFIQ AHRAYQQNQD GQEAQRVFLD VIDRGTHGVR TTMADTPFI