| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0543 |
|---|
| Symbol | |
|---|
| ID | 5897998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 591892 |
|---|
| End bp | 592821 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641561026 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001682175 |
|---|
| Protein GI | 167644512 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.791494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCATG TGGACCTGAA CCTTCTTCTG GCGTTGGACG CCCTGCTTGC CGAAGGCGGT
GTGACCGGGG CGGCTCGACG CCTCGACTTG AGTCCTTCCG CCATGAGCCG GACGCTGACG
CGCCTTCGGT CGGCAACGGG CGATCCGCTG CTCGTGCGCG CCGGACGCGG GCTCGTACCC
ACACCCTACG CCGCCGAGCT ACGCGAGCGC GTCCATGCGC TTAGCCGGGA CGTGCTGGCG
GTCCTCCGCC CGAACGTTAA CCATCTGGAC ATCGGTTCGC TCGAACGGAC CTTCACCATT
CGGGCCAACG AAGGGTTTAT CGCCGCCCTT TCCGCTTCCC TGGTCGCAGC GATCACCAAG
GCTGCGCCGC GCGTCCGCCT GTGTTTCGCG CCCAAGCCCG AGAAGGACGC GCGCCCGCTT
CGGGAGGGGC AGATTGATTT GGAAATTGGC GTGCTAGGCG CCTTCGCGCC GGAGGTTCGC
ACGCAGTCTT TATTTCGAGA CAGATTCGTT GGGGTGGCTC GAATTGGGCA TCCGCTTCTT
TCGGGCACAG ATATTACGCC CAAAAGATAT GCAGCTTGCG ATCATGTTGT TGCGTCAAGG
AAAGGGAAAT TCACCGGACC TGTTGACGAC GCCCTGAAAG AGCTTGGGCT CCAACGGACG
ACATCTGTCG TAGTTCCGGG ATTTCCAGAT GCGATGCGAA TCGCTCGTCA CTCGGATTTG
ATCGCACTCG TGCCGCACTC GTGCCTCGGC AATAGCCTGG GAAACGACGG GACAGCGACA
GCTGGGCTTC AAAGCTTCGA GCTTCCGGTT CGCACGCCGG AGATCGTGAT TTCGGCGATG
TGGCATCCTC GGGTGGACGC CGACCCGGCG CATCGCTGGC TTCGCGACAC TGTCGCCTCA
GTATGCCGGC CGGCCAGTTC GCGACGCTGA
|
|---|
| Protein sequence | MDHVDLNLLL ALDALLAEGG VTGAARRLDL SPSAMSRTLT RLRSATGDPL LVRAGRGLVP
TPYAAELRER VHALSRDVLA VLRPNVNHLD IGSLERTFTI RANEGFIAAL SASLVAAITK
AAPRVRLCFA PKPEKDARPL REGQIDLEIG VLGAFAPEVR TQSLFRDRFV GVARIGHPLL
SGTDITPKRY AACDHVVASR KGKFTGPVDD ALKELGLQRT TSVVVPGFPD AMRIARHSDL
IALVPHSCLG NSLGNDGTAT AGLQSFELPV RTPEIVISAM WHPRVDADPA HRWLRDTVAS
VCRPASSRR
|
|---|
| |