Gene Caul_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0506 
Symbol 
ID5897961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp551433 
End bp552365 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID641560989 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001682138 
Protein GI167644475 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGC TCATCGTCCT GTCCCCCGAA ATTGCCGCGC CCTACCGGGA CGCCTTGTCG 
GCCGACTACC GGATCGCCGC TCGCCCGGAG GAAATCGCCG GGGCGCGGGC GGTCGTGATC
CGCGGCAGCG AGTCCTTCGA CGCCGCCCGC TTCGAGGCGA TGCCGGCGCT GTCCCTGATC
TGCTGCATCG GCTCCGGGCA CGACGGCGTT GACGCGGTCG AGGCGGCGCG GCGCGGGGTG
ACGATCGCCA CCAGCGGCGA CGCCAACGCC GCGGCGGTCG CGGACCATGC CCTGGCCCTG
CTGCTTGCGT CGGTGCGGCA GGTCGTCTCG AGCCAGGCCC TGCTGAGAGC CGGCGACTGG
CGGTCCCAGG CGACGCGAAT CGTGTCGCGC CCGGGCCTGA CCGGTCGACG CGCGGGCATC
GTGGGATTGG GAGCCATCGG CCGCCGCATC GCCGCCCGCC TTTCGAGTTT CGATTGCGAG
ATCGGCTATA CTGGCCGCAC GCTGCGGGAC TCGCCCCATC GATATTTCGA GACCCCGCTC
GCGCTGGCCC AATGGGCCGA TGTCCTGATC CTTTCCCACC GGGCGAACGC GGACAACGCC
GGTCTCGCCG ACCGCAAGGT TCTCGACGCT CTGGGACCGG ACGGTTGCCT GGTGAACGTC
AGCCGGGGCT CGGCCGTCAT TGAAGATGAC CTTGTCGCCG CCCTCCGCGA AGGTCGGTTG
GGCGGCGCCG CGATCGACGT CTTCGAAGGC GAACCCCAGC CTTCGCAGGC CCTGATCGCC
TGTCCCAACC TCATCGTGAC GCCCCACATC GCCGGTGGCA CGCGGGAGGC GCTCCAGGCC
ATGTTCGCGG CCGTGCGACA GACCTTGAAG CTCTATTTCG CCGACGAGGG CGCGGAAGCG
ACCTCGGCGA ACTCCTTCAT CCGCGAGGAA TAG
 
Protein sequence
MSPLIVLSPE IAAPYRDALS ADYRIAARPE EIAGARAVVI RGSESFDAAR FEAMPALSLI 
CCIGSGHDGV DAVEAARRGV TIATSGDANA AAVADHALAL LLASVRQVVS SQALLRAGDW
RSQATRIVSR PGLTGRRAGI VGLGAIGRRI AARLSSFDCE IGYTGRTLRD SPHRYFETPL
ALAQWADVLI LSHRANADNA GLADRKVLDA LGPDGCLVNV SRGSAVIEDD LVAALREGRL
GGAAIDVFEG EPQPSQALIA CPNLIVTPHI AGGTREALQA MFAAVRQTLK LYFADEGAEA
TSANSFIREE