Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0484 |
Symbol | |
ID | 5897939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 524875 |
End bp | 527046 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641560967 |
Product | TonB-dependent receptor |
Protein accession | YP_001682116 |
Protein GI | 167644453 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTC GATACGTATT GCTTGCATCA TCCGGCGTCC TGGCGCTGGC TCTGGCTTCG ACGGCCGTCG CCCAAACCAC GCCGGCGCCC TCTGAGGCCT TCGCGCTGGA TGAGGTGGTG GTCACCGCCC AGAAGCGTTC GGAGAATCTG CAGGACGTGC CGCTGACCCT GTCGGTGTTC GGCGCCAAGG AGATCGAGCA GGCCCGCATC GTCCAGGTGC AGGACGTGGC CAACCGCACC CCGGGGCTAA ACTTCGACAC CTTCCCCAGC AGCCAGCCGC GGCCGACCCT GCGTGGCATC GGCTCGTCCG ACCGCGGCGC AGCCGGCGAC CCCTCGGTGT CGGTGTTCAT CGACGAGGTC TATTACGGCC GCCCCTCGGC CGTGGCCTTC GACGCCTTCG ACGTCGAGCG CATCGAAGTG CTGAAGGGGC CGCAAGGCAC GCTGCTGGGC AAGAACGTGG TTGGCGGCGC GCTGAGCATC ATCAATCGTA AGCCGCAAGC CGACGGTTTC GACGCCGGGG CGTCGGTTAC CGTTGGGAAC TACTCGCGGC TCGAAGGCGC TGGATTCGTC AACGCCCCGC TGGCTGACGG AAAGGCCGCC GTCCGCCTCA GCCTCAGCTC GCGCAATCAC GACGGCTATA CCAGGAACGC CTATGCCGGC GGACGGGCCG AGGATCAGGC CACCGACAGC GGTCGTCTGC AGTTGCTGCT CCAGCCCAAC GACGCCTTCT CGGCGATCCT GGCCGTGGAT GGCACGCGTG ACCGCGGCAA CAGCGACGCC CGCCACGCGG TGCAGGTCGA TCCCAGCGTT CCAGCCAGCG CCCTGTGGCG CATCAAGGGC CAGCGCGACG AGTACTATGC CGAGAACAAC GGCCGCAACG ATCGCGACAC CTGGGGCGTG CGGGCCAATC TCAACTGGGA CCTGTCGGCC TTCGCGCTGA CCTATGTCGG CTCGTATCGC GAGTTGACCT ATCACTACGC CGAGGACTTC GACGGCGGCA ATCCGACCCT CTACGCCTTG AACTTCCGCG GCGGCCAGGA CGAGAAGAGC AGCTTCTACA GCCACGAACT GCGCGCCTCG GCGCTGCCCA GCTCCAAGCT GCGCTGGGTG GTCGGCGCCT ACTATTTCGG AGCGGACACC CAGCGGACAG ACAGCCTGCT GGCCGACATA AAATCGCGCC CGACCCCGCC GGCCACCTAT GCGGCCAAGG ACCTCTTCCA CCAGGACGCC CAGACGGACA GCTGGGCCCT GTTTGTCGAC GCCACCTGGC CGGTCACCGA CCAGATCAAC GTCTTCGGCG GCCTGCGCTA TTCCAAGGAC CAGAAGGACT ACGCGCTCAA CAATCTGGAC TCCACGGCGC TGCTGCGCGC CGCGACTCGC TACAGCATCG ACGCCAGCCA CGACTGGGAC AAACTGACCT GGAGGCTCGG CGGCGACTTC TCGCCAAGCG ACAACGTCAT GCTGTACGGT GTGGTCTCGA CGGGCTTCAA GAGCGGCGGC TACCAGGACA CGCCGTCTAC GGCGACCTCG GCGACCACGC CGTTCAATCC CGAGAACGCC ACCCTCTATG AGCTGGGCGC CAAGACGACC CTGCTGGATC GCCGGCTGAC CTGGAACACC TCGATCTACC AGACCGACTA CAAGGACCTG CAGGTGCGCA GCACCCGGGG CTTCGACACC ATCACCACCA ACGCTGGCTC CGCGCGCATC CGCGGGCTGG AGACCTCGCT CGACGCGCGG CTGGGCGAGC GCCTGCGGGT GGCGGCCAGT TACGCCTATA CCGACGGCAA GTTCCTCAAC CTGGTCGACC GCGGGCAGGA TCGTTCGGGC AACCACATGA CCCGCAGCCC CAAGCACAAG GTCACCCTGT CGCCCAGCTA CGCCCAGCCG CTGAGCTCGG GAGCGCGGCT GACGGGGGCG GTCGATCTGG CCTACGAAAC CAAGATCTGG GACGATATCG ACAACAACCC GATCACCGTC CGCAAGCCCA AGCTGCTGGC TGATGGACGT GTCGTCTACG ACAGCGCGGG CGGGCACTGG AACCTGTCGG TCTGGGGCAA GAACCTGACC GATCGGCTCT ATCGCACCCA CCAGGTGGTG TTCCAGGGCG CGGACCTGGC CACCTTCGGC GCGCCGCGCA CCTTCGGCGC CACCCTGAAC TGGAAATACT AG
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Protein sequence | MNARYVLLAS SGVLALALAS TAVAQTTPAP SEAFALDEVV VTAQKRSENL QDVPLTLSVF GAKEIEQARI VQVQDVANRT PGLNFDTFPS SQPRPTLRGI GSSDRGAAGD PSVSVFIDEV YYGRPSAVAF DAFDVERIEV LKGPQGTLLG KNVVGGALSI INRKPQADGF DAGASVTVGN YSRLEGAGFV NAPLADGKAA VRLSLSSRNH DGYTRNAYAG GRAEDQATDS GRLQLLLQPN DAFSAILAVD GTRDRGNSDA RHAVQVDPSV PASALWRIKG QRDEYYAENN GRNDRDTWGV RANLNWDLSA FALTYVGSYR ELTYHYAEDF DGGNPTLYAL NFRGGQDEKS SFYSHELRAS ALPSSKLRWV VGAYYFGADT QRTDSLLADI KSRPTPPATY AAKDLFHQDA QTDSWALFVD ATWPVTDQIN VFGGLRYSKD QKDYALNNLD STALLRAATR YSIDASHDWD KLTWRLGGDF SPSDNVMLYG VVSTGFKSGG YQDTPSTATS ATTPFNPENA TLYELGAKTT LLDRRLTWNT SIYQTDYKDL QVRSTRGFDT ITTNAGSARI RGLETSLDAR LGERLRVAAS YAYTDGKFLN LVDRGQDRSG NHMTRSPKHK VTLSPSYAQP LSSGARLTGA VDLAYETKIW DDIDNNPITV RKPKLLADGR VVYDSAGGHW NLSVWGKNLT DRLYRTHQVV FQGADLATFG APRTFGATLN WKY
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