Gene Caul_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0445 
Symbol 
ID5897902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp489542 
End bp490759 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID641560931 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001682080 
Protein GI167644417 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.225942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGAAGA TCGCCACACC GGACCCCGGG CCGACGGGCC CCCTGAAAGG CGTCCGCATC 
GTCGATCACA CCACCATCCT GTTTGGGCCC TATGCGACCC AGATCTTGGC GGACCTTGGG
GCGGACGTGA TCAAGGTCGA AGCCGTCGAC AGCACGGGGA AGGCCGGCGG CGACGCCTGG
CGAGGGATCG GGCCGACCCC GCCCGGCGGC GAGGGCCTTG GCCCGCTCTT CATGATGACC
AATCGCAACA AGCGGTCGGT CGCCCTGGAC CTTCGCACCG ACGAGGGCGC GGCGCAGATG
CGAACCCTGC TCGCCACCGC CGACGTCTTT GTCTCCAACA CCCGCGCCTC GGCGCTCGAC
CGATTGGGCC TGGGCTACGA GCAGGTCAGC GCCGCCCATC CCGCCCTGAT CTACGCCCAT
GCGTCAGGCT ACGGCGCGCA GGGCCCCTAT GCCGGCCGGG CGGCCTATGA CGACGTCATC
CAGGCCGGAT CTGGTCTTAG CCACCTGGTC GGCCGCACCG ATCCGGAGGG CCGGCCGCGT
TACGTGCCCT CGGTGATGGC CGACAAGATC TCCGGCCTGT TCCTGGCCCA GGCGATCACC
GCGGCGCTCT ATGCGCGCGC GCGCGATGGC CGCGGTCAGT TCATCGAGAC GCCCATGCTC
GAATGCATGG TCAGCTTCAA CATGGTCGAG CACCTGTTTG GCCATGTCAG CGAGCCGCCG
GTCGGGCCGA TGGGTTATCC GCGCCTTTTC AACGCCGGGC GGCGGCCCCT GCGCACCGGC
GACGGCTATA TCGCCGTGCT ACCCTACGAC CTGGCGGCTT GGCGTCGCCT CTTGCAGGCC
CTGAACCTGG AAAGCTCACT GATCGATGAC CCAGTCTATT TTGGCCCCAG CGGGCCAGAG
CTGGAGCGTC TGTGTCCGCG CCTCGAGGCG GCGCTGCAAT CGGCGAGCGC GGAGGTCTGG
GTCGAGCGCT TGCTGGCGAT CGATCTGGCC GTCGCCAAGG TCAACAGCCT CAACGACGTC
CTAGCCGATC CGCACCTGGA ACAGGTGGGC ATGTTCGAGA CCTTTGAACA CCCCGCGTTT
GGGCCCTATC GCGCCATCCG CCACCCCGTG CGTTATTCCC AAACGCCGGC CAACATCTAC
CGACATCCGC CCGCCTTGGG GGAACACACC GCAGAGGTCG CCTCGGAAAT CTCCGCCGCC
GGGGAGGATC AAGCGTGA
 
Protein sequence
MSKIATPDPG PTGPLKGVRI VDHTTILFGP YATQILADLG ADVIKVEAVD STGKAGGDAW 
RGIGPTPPGG EGLGPLFMMT NRNKRSVALD LRTDEGAAQM RTLLATADVF VSNTRASALD
RLGLGYEQVS AAHPALIYAH ASGYGAQGPY AGRAAYDDVI QAGSGLSHLV GRTDPEGRPR
YVPSVMADKI SGLFLAQAIT AALYARARDG RGQFIETPML ECMVSFNMVE HLFGHVSEPP
VGPMGYPRLF NAGRRPLRTG DGYIAVLPYD LAAWRRLLQA LNLESSLIDD PVYFGPSGPE
LERLCPRLEA ALQSASAEVW VERLLAIDLA VAKVNSLNDV LADPHLEQVG MFETFEHPAF
GPYRAIRHPV RYSQTPANIY RHPPALGEHT AEVASEISAA GEDQA