| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0429 |
|---|
| Symbol | |
|---|
| ID | 5897703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 469757 |
|---|
| End bp | 471973 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641560915 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001682064 |
|---|
| Protein GI | 167644401 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTCATC GCAAAGCTTG GCTGTTGTGC GCTTCGGCTT TCACCGTCCT GGGCGCGCAC
AGCGCTTGGG CGCAGACCGC GCCGACGCCG GCCCAGGATT CGTCGACCAT CGAAGAGGTG
GTCGTCACCG CCGAGCGGGT CGCGGGCAAT GTCCAAACCA CGCCGATCTC GATCGCCGTC
TATTCGGGCC AGGCCCTGGA GGCTCGGGGC GTGGCCAGCA TTCGCGCGCT GAGCGTCATC
GACACCAGCA TCAACTTCTC CTCATCGGGC GGCCAGAACG TCGTTTCCAT CCGCGGCGTG
ACGAGCACCA ACGCCACCGA GACCGGCGAG CCGGCCGTCT CGGTGTCGAT GGACGGGGTG
TTCAACAACC GCGGCTATTC GCTCGGCGCC ACGATGTACG ACATCGCCCG GGTCGAGGTC
CTGCGCGGCC CGCAGGGCAC GCTGTTTGGC CGCAACACCA CCGGCGGCAT GCTCAACATC
ATCACCCAGC GCCCGGGCGG TGATTTCGCC GGCCGCGTGA CCGTCGACTT CGGCAATTAC
GACACCAAGA ACTTCGACGG CTTCCTGAAC GTGCCGATCA GCGACACCTT CAAGATGCGC
GCGTCCTTCT CGTCGCGCTA TCGAGACGGC TTCCGCAAGA ACACGCCGTT CGACCAGCGG
GCCGACGACG AGATCAACAA CTCCGGCCGC CTGCAGTTCG CCTGGGAGCC CACCGCGCGT
CTGCGCACCT GGCTGTCGCT GTCGGCCACC CATGAAGGCG GCATCGGCGG ATCAAGCGAG
TCGATCCCGT TCCGCTACGC GCCGGGCACC CCGCTAAACG CCACGGGTCA GCCCACCACG
CCCGGCACGC CGCCGCTTCA CACCATGCCG CCGCTGAGCG ACGGGGTGCA CTACACGATC
TATAGCAGCG CCGATCAGAA GATCGACACG CGCGACGCCA AGTGGAGCCT GGCCTACGAC
CTCAACGAGG CCGTGACACT CAGCTATCTG GGCGGTTACA ACACCATCGA CTTCATGAAG
GAGCTGCCGA CCTTCTTCCG CGGCAATCCT TCGCTGTTCA CCCGGCGCGA ACATCCCGAC
ACTTGGAATA ATGAAGTGCG GATCGCCTCG AACGCCGGTG GCCCGCTAAC CTGGCAAGCC
GGGGCCTTCG CCTATAGCGA AAAGTCGGGC CTGTTCACCG ACTTCATTCG CAATCCGGGC
GCGGCCACCG CCACCGAACT CTATCAATTC GATACGCCCC TGGTGAAGGC GACGTCCAAG
GCCCTGTTCG CCCAAGCCAA TTTCAACATC ACCGATGCGT TGAAGATCAC CGGCGGCGTG
CGTCACACCT GGGATGAGAA AACCCGTCGC GGCATCTTCC GCATTCGTCC GGCCTATACC
GGCGCGCCGG TGACCGTCAC CCAAACCCAG GACGGCGACG CCAAGTCCGA CAAGACCACA
TGGTTGGTCG GCCTCGACTA TCAAGTCACC GACCGCAACC TGCTCTACGG CAAGGTCAGC
ACCGGCTATA AGAGCGGCGG CTTCACCGGC GCCAGCCAGT ACAAGCCCGA GACCATGATC
TCCTACGAGG TAGGAACCAA GAACCGGTTC TTCGACAACT CCCTGCAGCT GAATCTGGCC
GCCTACCTGA TGAATTATGA AGACCAGCAG GTGAACCAGT ACCTGGCGGT TGGTGGCGGC
CCGGTGCAGG CGGTGACCAC CAACGCCGGC GAGTCGGAGA TCTACGGCCT GGAAACCAAC
GTCATCTCCA CCTCGGATCT TGGTCGGTTC GAGCTATCGG CCAACCTTTT GCACGCCCGC
TACAAGACCT TCGTGCTGGG CGCGGGCTGG TCCTCGCCTC CGGCCGTCAC CGTGCTGCTG
GACCTGGAAG GCAACCGCCT GCCGGTCAGC CCCGACCTTT CGGTCAGCCT GCAATGGGAA
AAGTCGTTCG CCCTCTTCGG CGGCGCGCTA ACCCCGCGCG CGGCGGTCAA GCATCAAACC
AAAATCTACT ACGCGCCCAA CAACTACGAG GACCAAAAGC AGGGGGCGTT CGAGACTGTG
GATGTCAGCG CCACCTGGGC GCCGGCCGCG GGCAACTGGT CGGTGCAAGC CTACGCCAAC
AACCTGTTCG ACGTCGATCG CATCAACTAC GCCGACGAGA ACTATAATTT CGGCGTCTAC
AACGTGGCCT ATGCGCCGCC GCGCACCTAC GGCGTGCGAA TCAGCGCCTC GTTCTAA
|
|---|
| Protein sequence | MRHRKAWLLC ASAFTVLGAH SAWAQTAPTP AQDSSTIEEV VVTAERVAGN VQTTPISIAV
YSGQALEARG VASIRALSVI DTSINFSSSG GQNVVSIRGV TSTNATETGE PAVSVSMDGV
FNNRGYSLGA TMYDIARVEV LRGPQGTLFG RNTTGGMLNI ITQRPGGDFA GRVTVDFGNY
DTKNFDGFLN VPISDTFKMR ASFSSRYRDG FRKNTPFDQR ADDEINNSGR LQFAWEPTAR
LRTWLSLSAT HEGGIGGSSE SIPFRYAPGT PLNATGQPTT PGTPPLHTMP PLSDGVHYTI
YSSADQKIDT RDAKWSLAYD LNEAVTLSYL GGYNTIDFMK ELPTFFRGNP SLFTRREHPD
TWNNEVRIAS NAGGPLTWQA GAFAYSEKSG LFTDFIRNPG AATATELYQF DTPLVKATSK
ALFAQANFNI TDALKITGGV RHTWDEKTRR GIFRIRPAYT GAPVTVTQTQ DGDAKSDKTT
WLVGLDYQVT DRNLLYGKVS TGYKSGGFTG ASQYKPETMI SYEVGTKNRF FDNSLQLNLA
AYLMNYEDQQ VNQYLAVGGG PVQAVTTNAG ESEIYGLETN VISTSDLGRF ELSANLLHAR
YKTFVLGAGW SSPPAVTVLL DLEGNRLPVS PDLSVSLQWE KSFALFGGAL TPRAAVKHQT
KIYYAPNNYE DQKQGAFETV DVSATWAPAA GNWSVQAYAN NLFDVDRINY ADENYNFGVY
NVAYAPPRTY GVRISASF
|
|---|
| |