Gene Caul_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0403 
Symbol 
ID5897677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp442839 
End bp444131 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID641560889 
ProductHipA domain-containing protein 
Protein accessionYP_001682038 
Protein GI167644375 
COG category[R] General function prediction only 
COG ID[COG3550] Uncharacterized protein related to capsule biosynthesis enzymes 
TIGRFAM ID[TIGR03071] HipA N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.173425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC AGGCCGCGGT CCTGGGCGTC TACCTGCTCG ATCGGCAAGG CGCCCCCCTG 
CGCGTGGGGG CCCTAACCCG TGACGGGGTC GGGGCGACGG CCTTCCTCCC CGACGAGGTC
TGGCTACGCG ATGAGGCGCG CCCGATCCTC AGCCTAACCT GGCTCACGCC AGGCGATCCT
GTGGAGACGC GCCGGCGGCT GAACTATCGT GGCGACAAGA TTGGCCTCTA CGGCGGCTTG
CCGCCCTGGT TCGCTGGCCT GCTGCCGGAG GGCGCGCTGC GCGATCTGGT CATCAACGAA
ATGGGGCCCG GCGACCACGA TCCGTTCGAC CTGATCACGC GTCTGGGCGC CGATCTGCCG
GGCGCGATCC TCGTGACGCC GGATAACGCG GAGGCGCCGG CCTCGGCTGG CCCCCTACGC
TGGGATCAGA TCGCGGGCTT TCGTACGCCC GTGCCCGACG GTCAGGTGAA GTTTTCCCTG
GCCGGCGTCC AACTGAAGTT CATCGCCGCC GATACTGGCC AGCGCTTCAC CGCGCCGGCC
CGCGCCGGCG AGGGCCGCTA TATCCTGAAG CTGGCGTCCG CCGCCCATCC AGGTCTGCCC
GAAGCCGAGT TCACAGCCAT GAGCCTGGCC AGAAGCCTGG GCGTGCGCAC GGCCAACTGC
CGCCTCGTTG CAAACGCGTC CATTTCCGCG GTCCCGGCCG CGATGCTGGT GGGCGAGCAC
GCCCTGGCCG TCGAGCGCTT CGACCGAACG ACCGGGGAGG GCCGTATCCA CATTGAGGAC
GCCGGCCAGA TTCTTGGCGC GGTGGGCGAA CGCAAGTACA CGGCCAACAG CGAAACCGTG
CTCAACATGA TCGCCCGTTT CAGCACGGAC TGGCGCGATG ACGTGCTCGA GGGTTTCCGC
CGCCTCGTGG CCGACATCCT GCTGGGCAAC GGCGACAACC ACCTCAAGAA CTGGTCGTTC
ATATTCCCGG CGCCCGGCGA GGTCCGGCTC TCGCCCGCCT ACGACATCGT CCCGACGGTC
TTGTTCTCGC CGCTCGATGA CACCTTGGGC TTGCCGTTCG CCAAAATCCG CCGGTTCGGC
TCGGTGCGCC TGCATCACTT CCGCCGCGTC GCCGAGCATC TGGGGCTTGA GCCGGATTGG
ATCGCCCGGG AGGTTCGTGA CCTCGTCGTC CGCGCGCTCG ATACTTGGCC GCAGGCCATG
GCCGACCTGC CCATATCCCG CGAGCGCGCC CAGGTCCTGC AAGCCCGCTG GCCCGACCTG
ACGCTCGTCA ACGAAAGCCG CCTATCCCGG TGA
 
Protein sequence
MAKQAAVLGV YLLDRQGAPL RVGALTRDGV GATAFLPDEV WLRDEARPIL SLTWLTPGDP 
VETRRRLNYR GDKIGLYGGL PPWFAGLLPE GALRDLVINE MGPGDHDPFD LITRLGADLP
GAILVTPDNA EAPASAGPLR WDQIAGFRTP VPDGQVKFSL AGVQLKFIAA DTGQRFTAPA
RAGEGRYILK LASAAHPGLP EAEFTAMSLA RSLGVRTANC RLVANASISA VPAAMLVGEH
ALAVERFDRT TGEGRIHIED AGQILGAVGE RKYTANSETV LNMIARFSTD WRDDVLEGFR
RLVADILLGN GDNHLKNWSF IFPAPGEVRL SPAYDIVPTV LFSPLDDTLG LPFAKIRRFG
SVRLHHFRRV AEHLGLEPDW IAREVRDLVV RALDTWPQAM ADLPISRERA QVLQARWPDL
TLVNESRLSR