Gene Caul_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0354 
Symbol 
ID5897628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp395262 
End bp396800 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content68% 
IMG OID641560839 
ProductUbiD family decarboxylase 
Protein accessionYP_001681989 
Protein GI167644326 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTACC GCAGTCTGCG CGAATTCATC GACGTCCTCG AGGCCAAGGG CGAGCTGGTG 
CGGGTGACCG AGCCGGTCTC GACCGTGCTG GAGATGACCG AGATCCAGAC CCGCCTGCTG
GCCACCGGCG GGCCGGCGGT GCTGTTCGAG CACGTGATCC TGCCCGACGG CGCGCGCTCG
CCGATGCCGG CGCTCGCCAA CCTGTTCGGC ACGGTCAAGC GCGTGGCCAT GGGCGTCACC
CTGGGCGGCG AGCCGCGCAC CACGGCCGGC GAACTGCGCG AGGTCGGCGA GTTGCTGGCC
TTCCTGCGCC AGCCCCAGCC GCCCAAGGGC CTCAAGGACG CCCTGGACAT GCTGCCCCTG
GCCAGGACCG TGATGGCCAT GCGGCCGGGC ACGGTCAGGA AGGCCCCGGT GCAGGAGGTG
GTGCTGACCG GCGACCAGAT CGATCTCTCC AAACTGCCCG TCCAGACCTG CTGGCCGGGC
GAGCCGGCGC CGCTGATCAC CTGGCCGCTG GTGGTCACCA AGGGTCCTGG CAAGGACCGC
GAGGACGACT TCAACCTGGG CATCTACCGC ATGCAGGTGA TTGGCAAGGA TCGCTGCATC
ATGCGCTGGC TGGCCCATCG CGGCGGGGCG CAGCACTATG CCCGCCACAA ACAAGCCGGT
CGAAGAGAGC CCCTGCCCGC CTGCGCCGTG CTGGGCGCCG ATCCCGGCAC CATCCTGGCC
GCAGTGACGC CCGTGCCCGA CACCCTGAGC GAATACCAGT TCGCCGGCCT GCTGCGCGGG
GCCAAGGTCG ATCTCGTGCC GGCCAAGACC GTGCCGCTGA TGGTGCCGGC CCACGCCGAG
ATCGTGCTCG AAGGCCACGT CCTGCTCGAT GAATATGCCG ACGAAGGCCC CTACGGCGAC
CACACCGGCT ATTACAACAG CGTCGAGAAG TTCCCGGTCT TCCAGGTGAC GGCGATCACC
ATGCGCAAGG ACCCGATCTA CCTGACCACC TTCACCGGCC GGCCGCCGGA CGAGCCGTCG
GTGCTGGGCG AGGCGCTGAA CGAGGTGTTC ATCCCGCTGC TGCGCCAGCA GTTCCCCGAG
ATCGTCGACT TCTGGCTCCC GCCCGAGGGC TGTTCCTACC GCATCGCCGT GGTGTCGATG
AAGAAGGCCT ATCCGGGCCA CGCCAAGCGG GTGATGCTGG GCGTCTGGAG CTATCTGCGC
CAGTTCATGT ACACCAAGTG GGTGATCGTC GTGGACCACG ACATCAACGC CCGCGACTGG
AAGGACGTGA TGTGGGCGAT CAGCACCAAG ATGGACCCGG CGCGGGACAT CACGGTGATC
GAGAACACCC CCATCGACTA TCTCGACTTC GCCTCGCCCG AGAGCGGCTT GGGCAGCAAG
ATCGGTCTGG ACGCCACCGA CAAGCTGTCC CCCGAAACCC ATCGCGAATG GGGGAACGAG
ATCCGCATGG ACCAGGCGGT GATCGACACC GTCAGCGAGA AGTGGGCGCG GCTGGGCCTG
CCGGGGGATG GGAAGCCGAT CTGGAAACCC AAGCCGTAA
 
Protein sequence
MAYRSLREFI DVLEAKGELV RVTEPVSTVL EMTEIQTRLL ATGGPAVLFE HVILPDGARS 
PMPALANLFG TVKRVAMGVT LGGEPRTTAG ELREVGELLA FLRQPQPPKG LKDALDMLPL
ARTVMAMRPG TVRKAPVQEV VLTGDQIDLS KLPVQTCWPG EPAPLITWPL VVTKGPGKDR
EDDFNLGIYR MQVIGKDRCI MRWLAHRGGA QHYARHKQAG RREPLPACAV LGADPGTILA
AVTPVPDTLS EYQFAGLLRG AKVDLVPAKT VPLMVPAHAE IVLEGHVLLD EYADEGPYGD
HTGYYNSVEK FPVFQVTAIT MRKDPIYLTT FTGRPPDEPS VLGEALNEVF IPLLRQQFPE
IVDFWLPPEG CSYRIAVVSM KKAYPGHAKR VMLGVWSYLR QFMYTKWVIV VDHDINARDW
KDVMWAISTK MDPARDITVI ENTPIDYLDF ASPESGLGSK IGLDATDKLS PETHREWGNE
IRMDQAVIDT VSEKWARLGL PGDGKPIWKP KP