Gene Caul_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0260 
Symbol 
ID5897534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp286134 
End bp287168 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID641560744 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_001681895 
Protein GI167644232 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0421286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCC GCCCCGTGAT TTCGAAATTC GCAGCAGGTC TTGGCCTCGT CGCCGCCCTG 
GCCCTGGCCG GGTGTGGCGA GAAGAAGACG CCCGCGCCGG TCGCCAAGGA CACGATCGTG
TTCTCGATCC TGTCGACCGA GTCGGCCCAG AACATGGAGG GCTACTGGAA GCCCATCCTG
GCCGACATGG AGGCGTCGAC CGGCATGAAG GTGAAGCCGT TCTTCTCGTC CAACTACTCG
TCGCTGATCG TCGCCATGGG CGCCAAGCAG ACCGATGTCG GCTGGTTCTC CAACCAGTCG
GGCCTGGAGG CCGTGCGCCG CTCGGGCGGC GAGGTCTTCG CCCGCACGTT CGACCCGTCG
GGGACCGACG GCTACAAGTC GGTGATCATC GTGCCGGTCG ACAGCAATCT CACCGTTGAA
GGGTTGCTCA AGTGCGACAA GACCCTGAAC TTCGGGATCG GCGACAAGAA GTCGACCTCG
GGCACCCTGG CCCCGATGAC CTACCTGTTC ATCCCGGCCA ACAAGAAGCC CGAGACCTGT
TTCAAGACCG TGCTGAGCGC CAGCCACGAC GCCAACCTGT TCGCGGTGGC CAACAAGAAG
CTCGACGCGG CGACCAACAA CTCCACGGCC CTGAGCCTCA ACCGCCTCGC CAAGGGCGGC
GCCCAGGCCA ACAAGGTCAA GGTGATCTGG GAGTCGCCGA CCTTGCCGGA AGACCCGATC
GTCTGGCGCA AGGATCTGGA CCCCGTGGTC AAGGAAAAGC TGCGCCAGTT CTTCCTGACC
TACGGCCAGG GCGACACCCC GGTGGCGGCC CAGCAGCGCG CCAATCTCAA GCGTCTGAGC
ATGGGCGGCT TCAAGGCCGC CGATGACAGC CACCTGCTGG TGGTGCGCGA GATGGAGGCC
CTGGAGAATG TCGGCCTGGC CCGCGAGGCC GGCGACGCGG CCAAGCTGGC GGCGGCCGAG
AAGACGCTGG CCGGCATCAA GGCCGAGCGC GTGGTCGCCG AAGGCAAGGC CGGCCTCGCC
GCCCCGGTCA ACTAG
 
Protein sequence
MISRPVISKF AAGLGLVAAL ALAGCGEKKT PAPVAKDTIV FSILSTESAQ NMEGYWKPIL 
ADMEASTGMK VKPFFSSNYS SLIVAMGAKQ TDVGWFSNQS GLEAVRRSGG EVFARTFDPS
GTDGYKSVII VPVDSNLTVE GLLKCDKTLN FGIGDKKSTS GTLAPMTYLF IPANKKPETC
FKTVLSASHD ANLFAVANKK LDAATNNSTA LSLNRLAKGG AQANKVKVIW ESPTLPEDPI
VWRKDLDPVV KEKLRQFFLT YGQGDTPVAA QQRANLKRLS MGGFKAADDS HLLVVREMEA
LENVGLAREA GDAAKLAAAE KTLAGIKAER VVAEGKAGLA APVN