Gene Caul_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0258 
Symbol 
ID5897532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp283816 
End bp285078 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID641560742 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001681893 
Protein GI167644230 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.135065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACACGT ACCATAACCC CCTGGACCTG GTCCGTGAGC GGTCACCGGA ACGTCCCGTC 
GCACTTGTGC GACCCGACGC GGTGTCTGTA GCGGCGCGCT GGTTCCAGGC TGAATTCAAG
GGCGACGTCT TTTACGCGGT GAAGGCCAAT CCTTCGCCGT GGGTGATCCG CGAGCTCGCG
GACGCCGGCG TGCGGTCCTT CGACGTGGCG TCGCTGAACG AGATCGAGCT GGTCTCCCAG
CACGCTCCCG GCTCGCGCAT GGCCTTCATG CACCCGGTGA AAAGCCGCGT GGCGATCTCG
GCCGCCTATT TCGATCACGG CGTGCGCACC TTCTCGTTCG ACACCCACGA AGAGCTGGCC
AAGATCCAGG ACGCCACCGG CGCCGCCAAG GACCTCAACC TGATCGTCCG CATGGGCGTG
CAGGCCGATG GCGCGGCCTA CAGCCTGTCG GGCAAGTTCG GCGTCGAGCC GCACAACGCC
CCGGCCCTGC TGCTGGCCGC CCGTCGCGCC ACCCAGGACC TGATGGGCGT GTCGTTCCAC
GTCGGCAGCC AGTGCATGCG TCCCACCGCC TACCAGGCGG CCATGGCCCA GGCCTCGCGC
GCCCTGGTGC GCGCTGGCGT GCTGGCCGAC GTCGTCGACG TGGGCGGCGG CTTCCCGTCG
ATCTATCCGG GTATGGTCCC GCCCGACATG TCGGAATACA TGGCCGCCAT CGATCGCGGC
TTCAACGACA TGATGGTCCA CGAGTCGACC CAGCTGTGGT GCGAACCCGG CCGCGCCCTG
GTGGCCGAGG CCTCGTCCGT GCTGGTCAAG GTCGAGCTGA AGAAGGGCGA CGCGCTCTAT
CTGAACGACG GCAGCTACGG CTCGCTGTTC GACGCGGCGC ACATGAAGTG GCCCTTCCCG
GTCAAGGCCT ACCGCAAGGA CGGCGGCGAA GTGTCGGAGG AGGCCTTGCG CCCCTTCCGC
TTCTACGGCC CCACCTGCGA CAGCGTCGAC CACATGCCGG GTCCCTTCTA CCTGCCCGAC
GGCATCGACG AGGGTGACTA TATCGAGATC GGCATGCTGG GCGCCTATGG CGTGGCGATG
GCGACCCGGT TCAACGGCTT TGGCGAGATC GACACCGTCG AGGTCCAGGA CGCCCCGATG
GCCTCGATGT ACGGCCTGGC CAAGCGCTCG ATCCCAACCC CGCGCCCCGA AGCCGAGGAA
CGCAAGATCG TCCGCTTTTC GCGCCCCAAG GGCGCGGCCG GCAAGAAGCG CCGTCGTCGC
TGA
 
Protein sequence
MHTYHNPLDL VRERSPERPV ALVRPDAVSV AARWFQAEFK GDVFYAVKAN PSPWVIRELA 
DAGVRSFDVA SLNEIELVSQ HAPGSRMAFM HPVKSRVAIS AAYFDHGVRT FSFDTHEELA
KIQDATGAAK DLNLIVRMGV QADGAAYSLS GKFGVEPHNA PALLLAARRA TQDLMGVSFH
VGSQCMRPTA YQAAMAQASR ALVRAGVLAD VVDVGGGFPS IYPGMVPPDM SEYMAAIDRG
FNDMMVHEST QLWCEPGRAL VAEASSVLVK VELKKGDALY LNDGSYGSLF DAAHMKWPFP
VKAYRKDGGE VSEEALRPFR FYGPTCDSVD HMPGPFYLPD GIDEGDYIEI GMLGAYGVAM
ATRFNGFGEI DTVEVQDAPM ASMYGLAKRS IPTPRPEAEE RKIVRFSRPK GAAGKKRRRR