Gene Caul_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0246 
Symbol 
ID5897520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp272743 
End bp273981 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content74% 
IMG OID641560730 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001681881 
Protein GI167644218 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.81066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG CAGCCTCGTC CGCCCCCACC AGCCTGATCC GTTCTCTTCC GCCGCGCGCG 
CTGAAGGCCG CGATCGAGGC GCACACGCGC TACCTGAAGG GGCGCCCGGG CGGGACGCGC
GCCAACCTCT CCTACGTCGA TCTCGACAAC GTCAACCTGG AGGGCGTCGA CCTCTCCGAG
GCCGATCTGA CCGGCGTTCG CCTGGCCGGC GCGCTGCTGT CACGGGCCAT ACTGGCGCGC
GCCACGCTGT ACGGCGCCGA CCTGCGGGAC GCCGACCTGC GTCAGGCCAA CCTCGCCCGC
TGCGACCTGC GCGGCGCCTG CCTGCGCGGG GCCAATCTGA GCGGCGCCGA CCTGTCGGGC
TGCGACCTGC GCGAGGGCGT CACCGCCACC CAGGATTCGG CCGAGGGCTT CAAGATTCTC
GGCCATCGAA CCCGTTCCGG CGAGTTGGAC TACGCCCTGG CGCGCGGGGC CAAGCTGGCC
GGCGCCCAGA TGGGCGGGGC CTTCGCCCAG GCCGTCGACC TGACCGACGC CGACCTGACG
GGCGTCAGCC TGCAGGGCGC CCGGCTGACC CGGGCGGTGC TGAACGGCGC CAACCTCTCC
CAGGCCAATC TCTATAACGC CGACCTGACC GGCGCGTCGC TGCGGCGGGC GGTGCTGACC
GGGGCCGACG TCGCCGGCGC GTCCTTCGAC GGCGCGGACC TGGCCGAGGT GCTGCGCGCC
CCGCCGCCGA TGATCTATGT CGATGACGCG CCGCTGCACG AAATCCTCGA GGCGCACGAA
CTGTTCGTGA CCAGCGACGG CCGCGACGGC GCGACGGCCA AGACCCCCTC GGTGGACTTC
CGGCCCCTAA GGCGCCTGAA GGGCCGGCGG CTCAGCGGCC TGTCGGCCCC CGGCGCGATC
TTCTTCGGCA TGAACCTGGA AGGCGTCCAG CTGCAGGGCG CCAACCTGGC CGACGCCGAT
CTGCGCGGGG TCAATCTGCG GGGCGCCGAC CTGCGGGGCG CGCGGCTGGT GGGGGCGCAA
CTGTCGCGGG CCGACCTGAC CGGCGCCAAC CTGGGACCGC TGGCGATCGC CCAGGGCCGC
GTCCTGCGCG CCGACCTCAG CCGCGCGGTC CTGCGCGGCG CCGATCTGAC CGGGGCCAGC
GCTCGCCGCG TCCGCCTGAT CGACGCCGAC CTGACCCGCT GCAAGCTCGA AGGCTGCGAC
CTGACGAGCG CCGAACTGCC CGAGGGCTTC GGGGCGTAG
 
Protein sequence
MSAAASSAPT SLIRSLPPRA LKAAIEAHTR YLKGRPGGTR ANLSYVDLDN VNLEGVDLSE 
ADLTGVRLAG ALLSRAILAR ATLYGADLRD ADLRQANLAR CDLRGACLRG ANLSGADLSG
CDLREGVTAT QDSAEGFKIL GHRTRSGELD YALARGAKLA GAQMGGAFAQ AVDLTDADLT
GVSLQGARLT RAVLNGANLS QANLYNADLT GASLRRAVLT GADVAGASFD GADLAEVLRA
PPPMIYVDDA PLHEILEAHE LFVTSDGRDG ATAKTPSVDF RPLRRLKGRR LSGLSAPGAI
FFGMNLEGVQ LQGANLADAD LRGVNLRGAD LRGARLVGAQ LSRADLTGAN LGPLAIAQGR
VLRADLSRAV LRGADLTGAS ARRVRLIDAD LTRCKLEGCD LTSAELPEGF GA