Gene Caul_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0230 
Symbol 
ID5897504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp250715 
End bp251599 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID641560714 
Productsuccinyl-CoA synthetase, alpha subunit 
Protein accessionYP_001681865 
Protein GI167644202 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.340698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTC TGATCGGTTC GCAGACCAAG GTCATCTGCC AAGGCATCAC CGGCGCCCAG 
GGCACGTTCC ACTCCGAGCA GGCCATCGCC TACGGCACCA AGATGGTCGG CGGCGTCACG
CCCGGCAAGG GCGGCCAGAC CCACATCGGC CTGCCGGTGT TCGACACGGT CGGTGAAGCC
CGCGAGGCCA CCGGCGCCGA CGCCACCGCG ATCTATGTCC CGCCCCCCTT CGCGGCCGAC
TCGATCCTGG AAGCCATCGA CGCGGAAATC CCGCTGATCA TCTGCATCAC CGAAGGCATC
CCGGTGCTGG ACATGGTCAA GGTCAAGAAG GCCCTGCAAG GCAGCAAGTC GCGCCTGATC
GGCCCCAACT GCCCCGGCGT CCTGACCCCG AACCAGTGCA AGATCGGCAT CATGCCCGGT
TCGATCTTCT CGCAAGGCTC GGTCGGCGTC GTGTCGCGTT CGGGCACCCT GACCTATGAA
GCGGTTTTCC AGACTACCAA TGCCGGCCTC GGCCAGACCA CGGCGGTCGG CATCGGCGGC
GACCCGGTCA AGGGCACCGA GTTCATCGAC ATCCTGGAAC TCTTCCTGGC CGACGACGCC
ACCAAGTCGA TCGTGATGAT CGGCGAGATC GGCGGCAGCG CCGAGGAAGA CGCCGCCCAG
TTCATCGCCG ACGAGGCCAA GCGCGGCCGC AGCAAGCCGA TGGTCGGCTT CATCGCCGGC
CGCACGGCGC CTCCGGGCCG TCACATGGGT CACGCCGGCG CGATCATCTC GGGCGGCAAG
GGCGGCGCGG AAGACAAGAT CGCCGCGATG GAAGCCGCCG GCATCCGCGT CTCGCCGTCG
CCGGCCAAGC TGGGCGAAAC CCTGCTCGAG GTGCTCAAGG GCTAA
 
Protein sequence
MSILIGSQTK VICQGITGAQ GTFHSEQAIA YGTKMVGGVT PGKGGQTHIG LPVFDTVGEA 
REATGADATA IYVPPPFAAD SILEAIDAEI PLIICITEGI PVLDMVKVKK ALQGSKSRLI
GPNCPGVLTP NQCKIGIMPG SIFSQGSVGV VSRSGTLTYE AVFQTTNAGL GQTTAVGIGG
DPVKGTEFID ILELFLADDA TKSIVMIGEI GGSAEEDAAQ FIADEAKRGR SKPMVGFIAG
RTAPPGRHMG HAGAIISGGK GGAEDKIAAM EAAGIRVSPS PAKLGETLLE VLKG