Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0228 |
Symbol | |
ID | 5897502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 245883 |
End bp | 249257 |
Gene Length | 3375 bp |
Protein Length | 1124 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641560712 |
Product | polysaccharide deacetylase |
Protein accession | YP_001681863 |
Protein GI | 167644200 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.523895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGCG ACGACCGGCA TATCTTCCAC GATCCCACCG GACGGCGGGA TCGGAGGATG CGGCTGATCC TGGGGATCGT CCTGTCGGCT CTGGCGGCGA TCGTCGCCGG CTTCCTGGCC ACCCTGGCCT TCGCGCCCCG CCTGCCGTCG GTGACCCTGC GGGACCCCCA CGTGCTATCG TCCCTGCACA AGGAGACGGC GCACCGCCTC AAGCCCGCCC TGGCCTGGCG CCAGGTCCCG CGCCCGACAG CGGGCGCCCA AGGGACGGGA GGCGGCTCGG CCCAGGTGCG CCCGATCAGC GTCGGCTTCT ATGTCAGCTG GGATGAGGAC TCCCGCGAGT CCCTGCGCCG CAACATCGAC AAGCTGGACG TGGTCTCGCC CCAGTGGGTG GCGCTGAAGG GGCCGGCCGG CGACATCGTC GTCGATGACG ACCCGCAGGG CGTGGCGCGC ATCGCCGCCG CCCCCAACCA TCCGGCCGTG CTGCCCCTGG TCCACAACTC GGCCAACGCC GCGTTCAACG GCCCCCTGGC CGACGCCCTG CTGGCCGATC CGAAAGCGCG CGCCAAGCTG ATCGCCAGCC TGGCCGACCT GGCCGTCAAG CGCGGCTACG GCGGCTATGT CTTCGACCTG GAAAGCCTGT CGGCCAAGGG GCTGGTGAAC TATCCCAAGC TGCTGGACGA GGCGCGCGCG GCGCTGAAGC CGCAGGGCCG CGAGGTCTGG GTCACCGCGC CGTTCGACGA GGAGGGCTGG CCGCTCAAGC GCCTGCAGGA CTCGTCCGAC ACCCTGGTGC TGATGGCCTA CGACCAGCAC TACGCCTTCG GCGATCCCGG TCCGAACGCC GGCCAGGACT GGTACGAGAG CGAGCTGGCC AAGCGTTTCG CCAAGCTCGA TCCGGCCCGC ACGATCATGG CCCTCGGCGC CTACGGCTAT GACTGGACGC TGAACAAGAA CGGCAAGCCC GCCTCGGGCT CGCCGGCCAC CTTCCACGAG GCCATGCGCA ACGCCCAGGA CGCCGGCGCG ACCATCGACA TGGACGACGA CGCCCTGAAC CCGACCTACG ACTATGTCGA CGATAACGGC GACAGCCACG TGGTGTGGTT CCTCGACGCC ACCACCCTGT TCAACCAGGT CAAGGTCACC GACGCGTGGA AGCCGCGCGG CTATGGCCTG TGGCGGATGG GCATGGAGGA CCCGGGCGTC TGGAGCGTTC TGGGCAAACC CTATGGCCAA GCCTCGGCCG CCGGCCTGAC CCGCATCCCG GCCGGCCAGA GCGTCGACTT CGACGGCGGC GGCGAGGTGC TGCACGTCTC GGCCCTGCCG ACGCCCGGCA AGCGGATCCT GGAATTCGAC CCCGACACCG GGCTGATCTC CGACCAGACC TACGCGGCGA TCCCCAGCTC CTACGTGATC GAGCGCTATG GCCAGAAACC GGGCCTGGTG GCCCTGACCT TCGATGACGG CCCCGACGCG CGCTGGACGC CCAAGATTCT CGACGTTCTC AAGGCCAAGA AGGCCCCGGC CACCTTCTTC GTGATCGGCG AGAACATGCA GGCCCGCCCC GACCTGGTGA AACGCGAGGT CGCCGAAGGG CATGACGTCG GCAGCCACAC CTGGACCCAC CCCAATATCG GCGAGACGCC CGTCGGCCAG ACCGACGTCG AGCTGAACGC CACCCAGCGC CTGTTCGAGG TGATCACCGG TCGCTCGATG CGGCTGTTCC GCCCGCCGTT CTTCGGCGAC GCCGAGCCCT CGACCCCGCA CGAGGTGGCG CCGCTGGTGA TCGCCCAGAC GCTGGGCTAC CTGATCGTCG GCCTGCGGAT CGACCCCGAC GACTGGCAGA AGCCGCCGCC CCAGGCGATC ATCGACCGCG CCCTCGAACG CCTCGACCAC CCCGGGGACC GGCCGGGCCA GGTGATCCTG CTGCACGACG CAGGCGGCAA CCGCGCCAAC ACCGTCAAGG CCCTGCCGCA GCTGATCGAC CAGATCCGGG CCCGCGGCTA TCGCCTGGTG ACCGTCGGCG AACTGGCCGG CATGACCCCG ACCCAGACCA TGCCGGTCAG CGACCGCGAC CCCCTGGCCC TGGCCCTGGA CCGCATGGGC TTTGGCCTGT TCCGGGGCGT GAAGGTGGCG CTGACCGCCC TGTTCCTGAC CGCCATCGCC CTGGGCCTGG CGCGGCTGGT GTTCCTGGCC TGCCTGGCCC TGGTCCATCG CTGGACACAC CAAAGCCCCG AGAATCTCGA TCCCGAGACC GGGCCGCTGG TCAGCGTGCT GATCCCCTGC TTCAACGAGG AGAAGGTGAT CGCCGCCTCG GTGGCCCGGA TCCTGGAATC GGAGTGGAAG AATCTCGAGG TCCTGGTCCT CGACGACGGC TCCAAGGACA ACACCGCGCA GGAGGTTCGC CGCGCCCACG GCGACGATCC GCGCGTGACG CTGCTGAGCT TCGAGAACGG CGGCAAGGCG CGGGCGGTCA ATCGCGGCCT GGCGATCGCC AAGGGCGACT ATGTCGTGGC CCTGGACGCC GACACGCTTT TTCCGCCGAA GACCATTGGG CGCCTCATAC GCTGGTTTCA GGACCCGACG ATCGGGGCGG TGGCCGGCAA CGCCATCGTC GGCAACCGGG TCAACATGGT CACCCGCTGG CAGGCCCTGG AATATGTCAC GGCCCAGAAC CTGGAGCGCC GTGCGCTGGC GGCCCTGGGC GCGGTGACCG TGGTGCCGGG CGCGGTCGGC GCCTGGCGCA AGAGCGTGCT GGACGCGCTG GGCGGCTATC CGTCCGACAC CCTGGCGGAG GACCAGGACC TGACCATCGC CTGCCAGCGG GCGGGCTGGA AGGTGGCCTT CGACCCCGCA GCCCAAGCCT TCACCGAGGC GCCCGACACG GTGGGCGGCC TGCTCAAGCA ACGCTTCCGC TGGTCGTTCG GCACCCTGCA ATGCGTCTGG AAGCACCGTG CGGCTTTGTT CAGCCCCAAG ACCCCGGCCC TGGGCTTCGT GGCCCTGCCG CAGATCTGGC TGTTCCAGAT CCTGCTGGCC GTCGCCGCGC CGCTGGTCGA TCTGGCGGTG GTCTGGAGCC TGATCTCCGG CGTCTACGGG GCCATCGCCC ATCCGGTCGA ATGGTCGCCC GACGACACCA TCCAGGGACT GCTCTACTGG GCGGTGTTCA TCCTGGTCGA CCTGTCGGCC GGCGCCCTGG GCATGGCCCT GGAGAAACGC GCGCCGTGGG CCGACCTGCC CTACCTGCCG GTGCAGCGCT TCGGCTATCG CCAGCTGATG TACTACGTGG TGGTCAAGTC GGTGCTGACC GCCGCGCGCG GCGGCCGGGT CGGCTGGGGC AAGCTGGAGC GGCGGGCGAC CGCGACGGTC AAGTCCGGAG GGTGA
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Protein sequence | MGGDDRHIFH DPTGRRDRRM RLILGIVLSA LAAIVAGFLA TLAFAPRLPS VTLRDPHVLS SLHKETAHRL KPALAWRQVP RPTAGAQGTG GGSAQVRPIS VGFYVSWDED SRESLRRNID KLDVVSPQWV ALKGPAGDIV VDDDPQGVAR IAAAPNHPAV LPLVHNSANA AFNGPLADAL LADPKARAKL IASLADLAVK RGYGGYVFDL ESLSAKGLVN YPKLLDEARA ALKPQGREVW VTAPFDEEGW PLKRLQDSSD TLVLMAYDQH YAFGDPGPNA GQDWYESELA KRFAKLDPAR TIMALGAYGY DWTLNKNGKP ASGSPATFHE AMRNAQDAGA TIDMDDDALN PTYDYVDDNG DSHVVWFLDA TTLFNQVKVT DAWKPRGYGL WRMGMEDPGV WSVLGKPYGQ ASAAGLTRIP AGQSVDFDGG GEVLHVSALP TPGKRILEFD PDTGLISDQT YAAIPSSYVI ERYGQKPGLV ALTFDDGPDA RWTPKILDVL KAKKAPATFF VIGENMQARP DLVKREVAEG HDVGSHTWTH PNIGETPVGQ TDVELNATQR LFEVITGRSM RLFRPPFFGD AEPSTPHEVA PLVIAQTLGY LIVGLRIDPD DWQKPPPQAI IDRALERLDH PGDRPGQVIL LHDAGGNRAN TVKALPQLID QIRARGYRLV TVGELAGMTP TQTMPVSDRD PLALALDRMG FGLFRGVKVA LTALFLTAIA LGLARLVFLA CLALVHRWTH QSPENLDPET GPLVSVLIPC FNEEKVIAAS VARILESEWK NLEVLVLDDG SKDNTAQEVR RAHGDDPRVT LLSFENGGKA RAVNRGLAIA KGDYVVALDA DTLFPPKTIG RLIRWFQDPT IGAVAGNAIV GNRVNMVTRW QALEYVTAQN LERRALAALG AVTVVPGAVG AWRKSVLDAL GGYPSDTLAE DQDLTIACQR AGWKVAFDPA AQAFTEAPDT VGGLLKQRFR WSFGTLQCVW KHRAALFSPK TPALGFVALP QIWLFQILLA VAAPLVDLAV VWSLISGVYG AIAHPVEWSP DDTIQGLLYW AVFILVDLSA GALGMALEKR APWADLPYLP VQRFGYRQLM YYVVVKSVLT AARGGRVGWG KLERRATATV KSGG
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