Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0218 |
Symbol | trmD |
ID | 5897492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 232248 |
End bp | 232985 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641560702 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001681853 |
Protein GI | 167644190 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.211635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTCA CCGCCACCGT CCTGACCATG TTCCCCGAGG CCTTTCCCGG CCCGCTCGGC GTTTCGCTGA TCGGTACGTC GTGGAAGGAA CAGGACCTGT GGCGTTTGGA AACACTGGAC ATTCGGGGCT TTTCCACAGA TAAGCGCGGC TTCCTCGACG ACACCCCCGC TGGTGGCGGC GCGGGAGCGG TACTCAAAGC GGACGTCATC GCCGCCGCGC TGGACAGCGT GGAGGTCGGT GGACGGCCGC TTTTGTACAT GAGCGCCCGG GGTCGGCCCC TGACCCAGGC GCGCGTCAAG GAATGGGCCA AGGCTCCGGG CGTCATCGTC CTGTGCGGCC GTTTCGAGGG GGTGGACCAG CGGGTGCTCG ACGCCCGGGG GTTCGAGGAG GTCTCGGTTG GAGACGCGGT CCTCGCCGGT GGCGAGGCGG CGGCGATGGT CGTGATCGAG GCGTGCGTTC GATTGGCTCC AGGGGTTCTG GGCAATTTCG AGAGCACGCA GGAAGAAAGC TTCGAGGACG GTCTCCTCGA GCATCCGCAG TACACGAGAC CGCGGACGTT CGAAGGGCTC GACATCCCCG AAGTGCTGCT GTCGGGCGAC CACAAGAAGG TGGCCCAGTG GCGGTCCAAC ATGCGTGAAG AGACTACTCG CGAGCGGCGG CCCGATCTCT GGGAAGCGCA TCTCGCCAAT CAACAGGCAA AAGGCGGCCC GAAAACGGGT AAGCCCAAAG GAGACTAG
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Protein sequence | MPFTATVLTM FPEAFPGPLG VSLIGTSWKE QDLWRLETLD IRGFSTDKRG FLDDTPAGGG AGAVLKADVI AAALDSVEVG GRPLLYMSAR GRPLTQARVK EWAKAPGVIV LCGRFEGVDQ RVLDARGFEE VSVGDAVLAG GEAAAMVVIE ACVRLAPGVL GNFESTQEES FEDGLLEHPQ YTRPRTFEGL DIPEVLLSGD HKKVAQWRSN MREETTRERR PDLWEAHLAN QQAKGGPKTG KPKGD
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