Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0216 |
Symbol | |
ID | 5897490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 229993 |
End bp | 231435 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641560700 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001681851 |
Protein GI | 167644188 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.146559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCG CACCGAAGAC CCTTTACGAC AAGATCTGGG ACGCCCACGT CGTCAGCCAA CTGGACGGCG AGGCGATCCT CTATATCGAC CTGCACCTGA TCCACGAGGT GACCACCCCG CAGGCCTTCG CCGGGCTCCG CGCGGCCGGC CGCAAGGTGC GCCGGCCCGA CCGCACGCTG GCCGTGGCCG ATCACAATAT CCCAACCGAG GGCCAGGCCC TGGGCGTCGA CGCCGTGGCC GACGAAGAGG CGCGCCTGCA ACTCCAGACC CTGGCGCGCA ACGTCAAGGA CAACGGCATA GAGTTCTTCC CGATGGGCGA CATCCGCAAC GGGATCGTCC ACGTGGTCGG TCCCGAGCAG GGCCGCACCC AGCCGGGCAT GACCATCGTC TGCGGCGACA GCCACACCTC GACCCACGGC GCCTTTGGAG CCCTGGCCCA CGGCATCGGG ACCTCCGAGG TCGAGCATGT GCTGGCCACC CAGACCCTGC GCCAGGAGAA GGCCCGGAAC ATGCTGGTGC GCGTCGATGG CCAGCTGGGT CCCGGCGTCA CGGCGAAGGA TGTTGCGCTG GCCGTGATCG GCGAGATCGG CACCGCCGGC GGCACCGGCT ACGTCATCGA GTTCGCCGGC GACGTGGTCC ACGACCTGTC GATGGAAGGC CGCATGACCC TGTGCAACCT GACCATCGAG GGCGGCGCCA AGGCCGGCCT GGTCGCGCCG GACGACAAGA CCTTCGCCTA TATCCAGGGC AAGCCTTCGG CGCCGAAAGG CGCGGCCTGG GACATGGCCC TGTCGTACTG GAAGAGCTTC GTCAGCGACG AGGACGCCCA TTTCGACCGC ACGGTGGTCA TCGACGGCTC GGCCCTGGTC CCGATGGTCA CCTGGGGCAC CAGCCCCGAG GACGTCATCC CGGTGACCGG CAATGTTCCA GATCCGGAAA GTTTCGCCAC GCCCGACAAG CGCGCCGCCG CCCACCGGGC GCTGGACTAT ATGGGCCTGA CCGCCGGCCA GCCGATCTCG GAAGCCCGCA TCGACCGCGT CTTCATCGGC TCGTGCACCA ACAGCCGGAT CGAAGACATG CGCGCCGCCG CCGCCGTAGT GCAGGAAGCC TTCCTGCACG GCCGCCTGGT GGCCCCGCAC GTCAAGGCGA TGGTCGTGCC GGGCTCGGGC CTGGTGAAGG AACAGGCCGA AGAAGAGGGG CTGGACGCCA TCTTCAAGGC TGCGGGCTTC GACTGGCGCG AGCCGGGCTG CTCGATGTGC CTGGCCATGA ACCCCGACAA GCTGCAGCCG CACGAACGCT GCGCCTCGAC CAGCAACCGC AACTTCGAAG GCCGCCAGGG TCGCGCCGGC CGCACCCACC TGGTCTCGCC GGCCATGGCC GCGGCGGCGG CGATCGCGGG CCATTTGGTC GATGTGCGCG CCCTGCTCGA GGAGACCATC TGA
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Protein sequence | MTRAPKTLYD KIWDAHVVSQ LDGEAILYID LHLIHEVTTP QAFAGLRAAG RKVRRPDRTL AVADHNIPTE GQALGVDAVA DEEARLQLQT LARNVKDNGI EFFPMGDIRN GIVHVVGPEQ GRTQPGMTIV CGDSHTSTHG AFGALAHGIG TSEVEHVLAT QTLRQEKARN MLVRVDGQLG PGVTAKDVAL AVIGEIGTAG GTGYVIEFAG DVVHDLSMEG RMTLCNLTIE GGAKAGLVAP DDKTFAYIQG KPSAPKGAAW DMALSYWKSF VSDEDAHFDR TVVIDGSALV PMVTWGTSPE DVIPVTGNVP DPESFATPDK RAAAHRALDY MGLTAGQPIS EARIDRVFIG SCTNSRIEDM RAAAAVVQEA FLHGRLVAPH VKAMVVPGSG LVKEQAEEEG LDAIFKAAGF DWREPGCSMC LAMNPDKLQP HERCASTSNR NFEGRQGRAG RTHLVSPAMA AAAAIAGHLV DVRALLEETI
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