Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0207 |
Symbol | |
ID | 5897481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 221290 |
End bp | 222072 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641560691 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001681842 |
Protein GI | 167644179 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.958881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.213463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTG ATAGCACCAT CGCCGCCGTC GTCACCGGGG GCGCCTCGGG CCTCGGCGAG GCCACCGCCC GCGCCCTGGC CGCGCAGGGT GTGAAGGTCG CGATCTTCGA CATGAACGAG GCCCGGGGCG AAGAGGTCGC CAAGGACATC GGCGGCGTGT TCTGCAAGGT CAACGTCACC TCGGACGCCG ACGTCGACGC CGGCTTCGAG AAGGCCCGCG CCGCCCACGG CCAGGAACGG ATCCTGGTCA ACTGCGCTGG CACCGGCAAC GCGGCCAAGA CCGCCGGCCG CGACAAGGCC ACCGGCGAGA CCAAGCACTT CCCGCTCGAC GCCTTCGACC GCATCATCCA GATCAACCTG GTCGGCACGT TCCGCTGCAT CGCCAAGTCG GCCAAGGGCA TGCTGGACCT GGAGCCGCTG GAAGACGGCC TGCGCGGCGC GATCGTCAAC ACCGCCAGCG TGGCGGCGGA AGACGGCCAG ATGGGCCAGG CGGCGTATTC GGCGTCCAAG GGCGGCGTGG TCGGCATGAC CCTGCCGATC GCCCGCGACC TGATGAGCGA GGGCATCCGC GTCAACTGCA TCCTGCCGGG CATCTTCAAC ACCCCGCTGA TGAACGGCGC GCCCGAGGCG GTGAAGGCCG GCCTGGCGGC CTCGGTGCCA TTCCCCAAGC GCCTGGGCAA TCCGGCGGAG TACGCCCATC TGGCCCTGAC GATGATCACC AACGACTATT TCAACGGCGA GGACGTGCGC CTGGACGGCG GCATCCGGAT GGCGCCGCGC TAG
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Protein sequence | MKLDSTIAAV VTGGASGLGE ATARALAAQG VKVAIFDMNE ARGEEVAKDI GGVFCKVNVT SDADVDAGFE KARAAHGQER ILVNCAGTGN AAKTAGRDKA TGETKHFPLD AFDRIIQINL VGTFRCIAKS AKGMLDLEPL EDGLRGAIVN TASVAAEDGQ MGQAAYSASK GGVVGMTLPI ARDLMSEGIR VNCILPGIFN TPLMNGAPEA VKAGLAASVP FPKRLGNPAE YAHLALTMIT NDYFNGEDVR LDGGIRMAPR
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