Gene Caul_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0207 
Symbol 
ID5897481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp221290 
End bp222072 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID641560691 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001681842 
Protein GI167644179 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.958881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.213463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG ATAGCACCAT CGCCGCCGTC GTCACCGGGG GCGCCTCGGG CCTCGGCGAG 
GCCACCGCCC GCGCCCTGGC CGCGCAGGGT GTGAAGGTCG CGATCTTCGA CATGAACGAG
GCCCGGGGCG AAGAGGTCGC CAAGGACATC GGCGGCGTGT TCTGCAAGGT CAACGTCACC
TCGGACGCCG ACGTCGACGC CGGCTTCGAG AAGGCCCGCG CCGCCCACGG CCAGGAACGG
ATCCTGGTCA ACTGCGCTGG CACCGGCAAC GCGGCCAAGA CCGCCGGCCG CGACAAGGCC
ACCGGCGAGA CCAAGCACTT CCCGCTCGAC GCCTTCGACC GCATCATCCA GATCAACCTG
GTCGGCACGT TCCGCTGCAT CGCCAAGTCG GCCAAGGGCA TGCTGGACCT GGAGCCGCTG
GAAGACGGCC TGCGCGGCGC GATCGTCAAC ACCGCCAGCG TGGCGGCGGA AGACGGCCAG
ATGGGCCAGG CGGCGTATTC GGCGTCCAAG GGCGGCGTGG TCGGCATGAC CCTGCCGATC
GCCCGCGACC TGATGAGCGA GGGCATCCGC GTCAACTGCA TCCTGCCGGG CATCTTCAAC
ACCCCGCTGA TGAACGGCGC GCCCGAGGCG GTGAAGGCCG GCCTGGCGGC CTCGGTGCCA
TTCCCCAAGC GCCTGGGCAA TCCGGCGGAG TACGCCCATC TGGCCCTGAC GATGATCACC
AACGACTATT TCAACGGCGA GGACGTGCGC CTGGACGGCG GCATCCGGAT GGCGCCGCGC
TAG
 
Protein sequence
MKLDSTIAAV VTGGASGLGE ATARALAAQG VKVAIFDMNE ARGEEVAKDI GGVFCKVNVT 
SDADVDAGFE KARAAHGQER ILVNCAGTGN AAKTAGRDKA TGETKHFPLD AFDRIIQINL
VGTFRCIAKS AKGMLDLEPL EDGLRGAIVN TASVAAEDGQ MGQAAYSASK GGVVGMTLPI
ARDLMSEGIR VNCILPGIFN TPLMNGAPEA VKAGLAASVP FPKRLGNPAE YAHLALTMIT
NDYFNGEDVR LDGGIRMAPR