Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0190 |
Symbol | |
ID | 5897464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 207254 |
End bp | 208984 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641560674 |
Product | major facilitator transporter |
Protein accession | YP_001681825 |
Protein GI | 167644162 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.397868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGACG ACGTCAAACC CTCGCCAGAG AATGGGGCCA CGCCGCCGAA GAAGACGCTT CTCCAGACCC TGGCCTTCTT CGGCGAACGC CGCAGCCTGG TGATGCTGGG CCTGGGGTTC GCCTCTGGCC TGCCCTACAT GCTGATCTTC GACACCCTGT CGCTGTGGCT GCGCGACGCC GGCCTGTCGT TGGCTGTGAT CGGCTTCTTC AGCCTGGCGA CCCTGTCGTT CTCGTTCAAG TTCCTGTGGG CGCCGCTGAT CGACCGCGCC AAGGTGCCGG TGCTGCACAA GCTGCTGGGC CACCGCCGCG CCTGGATCCT GGTCTTCCAG ATCGCGATGA TCCTGGGACT GTGGACGATC TCCACCTTGC ACCCCGCCTC GCAACTGGCC GCCCTGGGCG CCGGGGCTGT GGCGGTCGGC TTCGCCACGG CGTCCCATGA CATCGTCATC GACGCCTGGC GGATCGAAGT GGCCAACAAG GAAGAACAGG GGCCGATGGT CGTGGCCTAC CAGTGGGGCT ACCGGGTGGC CATGATCGCC GCCGGCGCCG GCCCCCTGCT GCTGGCCGAA CGCTTCGGCT GGAACTTCTC CTACGCCGTC ATGGGCGTCG TCGTCGGGGT CGGCGTCCTG GCCACCCTGT GGGCCCCGCG CGAGGCGGAG CACACCGTCC GCCCGATTCC GACCGGCGAC GTCAACCAGC CCCGGGCGCT GGAGATCCTG GAGTGGCTGG TGCGCCTGGC CATCCTGCTG ACCGGCGCCC TGGCCCTGGG CTCGGGCCTG GCGGGCGACG CGACCCTGCT GTCCAAGGTG GTCGGCGGCG AGGCCCTGGC CGACGCCTGG ACGGCCAAGC CGAACGGCGT CTGGCTGCAA CTGCTGGGCG TGATCACAGG TCTGGCCATC GTGGTGCTGG CGGCCTGGCC GATCCCCAAG GTGCGCACCA AGCCCGGCGT CTACATGTCG GCCGCGTTCG GCGAGCCGCT GATCGATTTC ACCCGGCGTT TCTCGGGCGT GGCGGGCCTG ATCCTGGCGG CGATCTGCGT CTACCGGGTC TCGGACTTCG TGCTCAACAT CATGAACCCA TTCTACCGCG ACATGGGCTT CTCGCTCACC GAGATCGCCG AGATCCGCAA GGTGTTCGGC ATCATCGCGT CGATGATCGG GGTGTTCATG GGCGGGGTGA TCGTGGCGCG GCTTGGCTTG ATGAAGGCCC TGGTGATCGG CGCCTTCGCC CAGCCGATCA GCAACCTGTT CTTCGCGTGG CTGGCCATGA GCGGCCACAA CGTGCCGGTG CTGTTCTGGG CGATCTGCAT CGACAACCTG GCCGGCGGCG TGGCCGGCAC GGCGCTGATC GCCTACATGT CCAGCCTGAC CACCGCGGGC TTCACGGCCA CGCAATACGC CCTGTTCTCG TCGCTGTACG CCTTGCCGGG CAAGCTGATC GCCTCGCAGT CGGGACGGAT CGTCGAGGCC TCGGCCATCG CCGCCGAAAA GGGCGGGCCG ATCGGCGCGC TGAAAGGCCT GTTCACCCGC CTGCCGCCCG AGAGCTTCAC CGCCGCCGGC GCCAAGCTGG GGGTCGGCGC CCCGGCCATG GCGGCGGGCT ACACGGCCTT CTTCATCTAC ACGGCGCTGA TCGGGATCGT CGCCATCGCG CTGTCGTTCC TGGTCGCCGT GCGCCAGCCG CGGCACATGG CGGCCAAGGC GGCGGCCGAG GCGGAGGCGG CTCAGGCCTA A
|
Protein sequence | MTDDVKPSPE NGATPPKKTL LQTLAFFGER RSLVMLGLGF ASGLPYMLIF DTLSLWLRDA GLSLAVIGFF SLATLSFSFK FLWAPLIDRA KVPVLHKLLG HRRAWILVFQ IAMILGLWTI STLHPASQLA ALGAGAVAVG FATASHDIVI DAWRIEVANK EEQGPMVVAY QWGYRVAMIA AGAGPLLLAE RFGWNFSYAV MGVVVGVGVL ATLWAPREAE HTVRPIPTGD VNQPRALEIL EWLVRLAILL TGALALGSGL AGDATLLSKV VGGEALADAW TAKPNGVWLQ LLGVITGLAI VVLAAWPIPK VRTKPGVYMS AAFGEPLIDF TRRFSGVAGL ILAAICVYRV SDFVLNIMNP FYRDMGFSLT EIAEIRKVFG IIASMIGVFM GGVIVARLGL MKALVIGAFA QPISNLFFAW LAMSGHNVPV LFWAICIDNL AGGVAGTALI AYMSSLTTAG FTATQYALFS SLYALPGKLI ASQSGRIVEA SAIAAEKGGP IGALKGLFTR LPPESFTAAG AKLGVGAPAM AAGYTAFFIY TALIGIVAIA LSFLVAVRQP RHMAAKAAAE AEAAQA
|
| |