Gene Caul_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0181 
Symbol 
ID5897893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp197077 
End bp197751 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID641560665 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001681816 
Protein GI167644153 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.235186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA AAACCGCCAT CGGCGTGGCC ATGATGGGCG CCCTGGCCCT GGCCGCCTGC 
ACCACCACCG ATCCCTATAC CGGCATGCCG GTGCGTAACA ACACGGGCAC GGGCGCGCTG
AGCGGGGCCG GCGTCGGCGC GGTGCTGGGC TATCTGACCA ACACCAACAA GGGCGAGCAG
GGTCGCAAGA ACGCCCTGAT CGGCGCGGGC ATCGGAGCCT TGGCCGGCGG CGCGGTCGGC
AACTACATGG ACCGTCAGCA GGCCGATTTC CGCCGCGGCC TGGAAGGCTC CGGCGTGATG
ATCCGCCGAA ACGGCGACCA GATCGTGCTG GTCATGCCCA GCGACGTCAC CTTCGCGGTC
GACAAGTCCG AGGTGCAGCC GCAGTTCACC CGCGTCCTCG ACGATGTCGC GCGCACGCTG
AACGCCTATC CTCAGACCAC GATCGACATT GTCGGCCATG CCGACAGCAG CGGCCCGGAC
GACTACAACC AGACCCTGTC GGAGCGCCGC GCCAGCTCGG TGGCCAGCTA CCTGACCAAT
GTGGGCCGGG TAGTCCCCGA CCGGGTCTTC GTGGCCGGCC AGGGCGAACG CCAACCGATC
GCCTCCAACG ACACCCCCGA AGGCCGCGCC CAGAACCGCC GGGTGGAGAT CATCCTGCGC
CCGCTGACGC AGTAG
 
Protein sequence
MIKKTAIGVA MMGALALAAC TTTDPYTGMP VRNNTGTGAL SGAGVGAVLG YLTNTNKGEQ 
GRKNALIGAG IGALAGGAVG NYMDRQQADF RRGLEGSGVM IRRNGDQIVL VMPSDVTFAV
DKSEVQPQFT RVLDDVARTL NAYPQTTIDI VGHADSSGPD DYNQTLSERR ASSVASYLTN
VGRVVPDRVF VAGQGERQPI ASNDTPEGRA QNRRVEIILR PLTQ