| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0177 |
|---|
| Symbol | |
|---|
| ID | 5897889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 193091 |
|---|
| End bp | 193591 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641560661 |
|---|
| Product | TspO and MBR like protein |
|---|
| Protein accession | YP_001681812 |
|---|
| Protein GI | 167644149 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.215544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCT CATCCATTCG TCGGGATCCG TGGAGCGGGC TGATCTCGGC GGGAGTCTCG
ATCGCCATCG CCCTGGCCGT CGGCGCCATT GGCGGCTTGG TGACCGCCTC GAGCGTCGAC
ACCTGGTACG CCGGTCTCAA CAAGCCGGCC TTCAATCCGC CCAATGCGGT GTTCGCCCCC
GTCTGGACGA CCCTCTACGT CGTCATGGCC CTGGCCGCTT GGCGCGTGTG GCGCGCGGAG
CCGGCCGGCG CTCGCCGCCG CTCAGCCATG ATCCTCTACG CCGTTCAACT GACCCTGAAC
CTCGCCTGGT CGCTGATCTT CTTTGGCCTG CGCCAGCCGG CCGTGGCCCT TGCCGAGGTG
GTCGTCCTCC TCATCGCCAT TCTCGCCACC ACCGCCGCCT TCTGGCGCAT CGACCGCACG
GCCAGCCTCA TGATGCTCCC CTACGCCGCC TGGACCGTGT TCGCCTCGGC CCTGACCCTG
GAAATCTGGC GACTGAATTG A
|
|---|
| Protein sequence | MTVSSIRRDP WSGLISAGVS IAIALAVGAI GGLVTASSVD TWYAGLNKPA FNPPNAVFAP
VWTTLYVVMA LAAWRVWRAE PAGARRRSAM ILYAVQLTLN LAWSLIFFGL RQPAVALAEV
VVLLIAILAT TAAFWRIDRT ASLMMLPYAA WTVFASALTL EIWRLN
|
|---|
| |