Gene Caul_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0172 
Symbol 
ID5897884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp188914 
End bp189519 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID641560656 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001681807 
Protein GI167644144 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.613725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGA AGCTGGAAGC TGGTCTTAAG CTGGTCGCGG CGACGCACAA CCCCGGCAAG 
GCCAAGGAAT TGGCCGCCCT GCTCGACGGC CGCTTCGAGG TGCTGGCCGC GGGGACCCTG
GGCCTGCCCG AGCCGGACGA GACCGAGATG ACCTTCGTCG GCAACGCCCT GCTCAAGGCC
CGCCACGCCG CCGACCTTTC GGGCCACATC GCCCTGGCCG ACGATTCGGG CCTGTCGGTC
GCCGCGCTCG ACGGCGCGCC CGGCATCTAT TCGGCCCGCT GGGCGGGTCC GACCAAGGAC
TTCGCCGTGG CCATGGACAA GGTCGCCGAG CGGGTCGAGG AGGCGGGGTC GGAGGACCGC
GCCGCCTGGT TCACCTGCGC CCTGGCCGTG GCCTGGCCGA ACGGCGGGCC GGCGGTGGTG
GTGCAGGGCG AGGTGCACGG GACCTTGACC TTCCCGCCGC GCGGCGACCG GGGCTTCGGC
TACGACCCGA TCTTCATCCC CGAGGGTTTC GACCAGACCT TCGGCGAGAT GGAGCCGGCG
GCCAAGGACG CCATGAGCCA CCGGGCCGTG GCGTTCGAGA AGCTGAAGGC GGCGCTGTTT
GAGTAG
 
Protein sequence
MTLKLEAGLK LVAATHNPGK AKELAALLDG RFEVLAAGTL GLPEPDETEM TFVGNALLKA 
RHAADLSGHI ALADDSGLSV AALDGAPGIY SARWAGPTKD FAVAMDKVAE RVEEAGSEDR
AAWFTCALAV AWPNGGPAVV VQGEVHGTLT FPPRGDRGFG YDPIFIPEGF DQTFGEMEPA
AKDAMSHRAV AFEKLKAALF E