| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0166 |
|---|
| Symbol | hrcA |
|---|
| ID | 5897878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 185097 |
|---|
| End bp | 186173 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641560650 |
|---|
| Product | heat-inducible transcription repressor |
|---|
| Protein accession | YP_001681801 |
|---|
| Protein GI | 167644138 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
|---|
| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.714476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.458775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGC TGTTTTCCGG GTTTTCCGCT CAGACGCCCA GTCTCACCGA CCTGGATGGG
CGGGCTCGCG ACATTTTCCG GCGGGTGGTC GAATCCTATC TCGAGACCGG CGAACCGGTC
GGATCGCGGA CCATCTCGCG CGGCGGGGTG CAGCTGTCGC CGGCCTCGAT CCGCAACACC
ATGCAGGATC TGGCGCAGCT GGGCCTGCTG GACGCCCCCC ATTCCAGCGC CGGCCGCATC
CCCACCCATG CGGGCCTGCG GATGTTCGTC GACGGCCTGC TGGAGGTGGG CGACATCGGC
GAGGAGGAGC GGCGGACCAT CGAATCGCGA CTGTTCGCCC ACGGTCGCTC GTTCGAAGAG
GCGATGGGCG AAGCCAGCGC CATCCTGTCG GGCCTGGCCG GCGGGGCGGG CATCGTAGTC
ACCCCGGTCC GCGAAGGCGG GGTCAAGCAC GTGGAGTTCG TGGCCCTGGG CGCCGACCAG
GCCCTGGCGA TCATGGTGTT CGACGACGGC ACGGTTGAGA ACCGGTTGAT GAAGCGCTCG
GCCGGCGTCA CGCCGGCCTC CCTGCAGGAG GCCTCCAACT TCCTCAACGC CCGCCTGCGC
GGCCGCACCC TGAACGAGGC CAAGACCGAG ATGGCGGCCG AGCTGGACAC GGCCCGGCGC
GAACTGGACG CCACGGCGGC GCGCCTGGTC GAGGACGGCC TGGCGGCCTG GAGCGGCGGC
GACGACCCCG ACCGCGCCCT GATCGTCCGC GGTCGCGCCA ACCTGCTGGC CGACGCCAGC
GCCCGGGAAG ATCTCGAGCG CGTCCGGCGG CTGTTCGATG ACCTGGAGCA GAAGGGCCAA
CTGATCGGCC TGCTGGACGA TGTGCGATCC GCCGAGGGCG TGCGCATTTT CATCGGGGCC
GAAACGCGAC TCTTTTCGCT TTCGGGTTCC TCCCTGATCG CGGCGCCCTA TATGTCGGGC
CGACAAAAGG TGTTGGGAGC GATCGGCGTG ATCGGTCCCA CGCGTTTAAA CTATGCCCGG
GTGATCCCGC TGGTGGACTA TACCGCTCGC GTGCTTGGCC GGATGATGGA CGGATAG
|
|---|
| Protein sequence | MTQLFSGFSA QTPSLTDLDG RARDIFRRVV ESYLETGEPV GSRTISRGGV QLSPASIRNT
MQDLAQLGLL DAPHSSAGRI PTHAGLRMFV DGLLEVGDIG EEERRTIESR LFAHGRSFEE
AMGEASAILS GLAGGAGIVV TPVREGGVKH VEFVALGADQ ALAIMVFDDG TVENRLMKRS
AGVTPASLQE ASNFLNARLR GRTLNEAKTE MAAELDTARR ELDATAARLV EDGLAAWSGG
DDPDRALIVR GRANLLADAS AREDLERVRR LFDDLEQKGQ LIGLLDDVRS AEGVRIFIGA
ETRLFSLSGS SLIAAPYMSG RQKVLGAIGV IGPTRLNYAR VIPLVDYTAR VLGRMMDG
|
|---|
| |