Gene Caul_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0158 
SymbolrecF 
ID5897870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp178141 
End bp179319 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content72% 
IMG OID641560642 
Productrecombination protein F 
Protein accessionYP_001681793 
Protein GI167644130 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.43131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.105898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCG CCGCCCTGCT GTCCCTGACC CTGACCGACT TCCGTTCCTA CGAACGCGCG 
ACCCTGCGTC CGGACGGCGC CAGCGTCTAT CTGTTCGGGG CCAACGGCGC CGGCAAGACC
AACCTGTTGG AGGCCATCAG CCTGCTCTCG CCAGGCAAGG GCCTGCGCGG CTCAAGCCTG
ATCGAGGTCG GCCGCCGGCT GCCGGGCGAA GCCACGGGGC GCGCCTGGGC CGTAGCCGCC
GAGACCGAGG CGCCCCAGAC TGACTTTGGC CAGGACGAGC CCGTGCGCCT GGGCACGGGC
GTCGAGCTGG CCGGCGCGGC CCGCCGCATC GTCCGCATCG ACGGCGAGAC CGTCCCGCCC
GGCCGCCTGG CCGACCATGT GCGCCCGATC TGGCTAACCC CGGCCCAGGA CCGGCTGTTC
CTGGAGGCCG CCTCCGAGCG CCGCCGGTTC TTCGACCGCC TGGTGTTCGC CGGCGAGCCC
GCCCACGCCG GCCACGCCAA CGCCTACGAC AAGGCCCAGC GCGAGCGCAT GCGCTTGCTG
ACCGACGCCG CCGAGAGCGG CCAGCCCGCC GACGCCGTCT GGCTGACCGC GCTCGAAGCC
CGGCTCGGCG CGGCCGGCGC GCTGATGGCC AACGCCCGGG CCCGCACCCT GATGGCTCTG
CAGGCCGAGA TCGACAGCCG GGGCGACCGC CCCTTTCCCC GCGCCCGCCT GGCCCTGACC
GGCGAGTGGG AGAAGCTGGC GCTGGTGGGC GTCGAAATCG CCGAGATCGA GGCCAGACTG
GCCGCCGCCC TGGCCGCCGC CCGCCCTCGC GACGGGGCCG CCGGACGGGC TCTGACCGGC
CCGCATCGCG GCGATCTGGC CATCCACCAC GTCGACAAGG ACCGTCCTGC CGCGGAATGT
TCGACCGGCG AGCAAAAAGC CCTGATTCTG AACCTGGTTT TGGCCCAGGC GGCGCGACTT
TCGCGTGCGA AGGACGCGCC GAATCCTATA CTATTGCTCG ACGAAGTCGC CGCGCACCTC
GACCTGAAAA GGCGAGCCGC CCTGGCCGAC GAAATCACGG CGCTCGGGCT CCAGGCCTTT
CTCACAGGCA CGGACCAATC GCTGTTCGAC CACCTGAAAG GTCGGGCTCT CGGCGTTCGC
GTCAGCGAAC TCGGCCTGAC CGCATTGGAA GACGTATGA
 
Protein sequence
MSRAALLSLT LTDFRSYERA TLRPDGASVY LFGANGAGKT NLLEAISLLS PGKGLRGSSL 
IEVGRRLPGE ATGRAWAVAA ETEAPQTDFG QDEPVRLGTG VELAGAARRI VRIDGETVPP
GRLADHVRPI WLTPAQDRLF LEAASERRRF FDRLVFAGEP AHAGHANAYD KAQRERMRLL
TDAAESGQPA DAVWLTALEA RLGAAGALMA NARARTLMAL QAEIDSRGDR PFPRARLALT
GEWEKLALVG VEIAEIEARL AAALAAARPR DGAAGRALTG PHRGDLAIHH VDKDRPAAEC
STGEQKALIL NLVLAQAARL SRAKDAPNPI LLLDEVAAHL DLKRRAALAD EITALGLQAF
LTGTDQSLFD HLKGRALGVR VSELGLTALE DV