Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0143 |
Symbol | |
ID | 5897855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 157133 |
End bp | 159727 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641560628 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001681779 |
Protein GI | 167644116 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.556848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.758309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAT CGTTCGACCG ACGCCTGGAT CGCCGTTTGA TTGGGGGCTC CACCGCAGTC GCGGCCCTGA TGCTCCTGGC CGCCCCCGTG GCCGTCCAGG CCCAGCAAGC CTTTCAGCAG ACCAGGGGGG CCACCTACAG CTTCGACATT CCGTCCCAGG ACCTGAGCGG CGCCCTGCGC GCCTTCGGCC AGGCCTCGGG CCAACAGCTG GCCTTCGACG AGGCCAGCGT GCGCGGCAAG CGCGCCCCGG CCCTTCAGGG CTCCTACACC GCCGAAGCCG CGCTCAAGCG TCTGCTGAGC GGCGCCGGCC TCAGCGCCCA GCCGACCGCC AGCGGCGTCT ACGCCATCCG CGCCAAGACC CTGCTGGTCG CCACCAGCGC CCAGGCCGAA GCGCGGCCCG CCGCCGCCGC CGAACCCGAT CCCGAAACGC CCTCGCAGGT CGAGGAAGTG ATCGTGGTCG GCACCCCCGG CGGCAAAGGG ATCGACAAGC TGTCGGCCAG CTTCGCGGTC ACCACCGTCA ACGCCGACGA CATCACCAAG GCCTCGCCCA AGAGCACGGC CGAGCTGCTG ACCCTGGTGC CCGGCGTCTG GGTCGAGACC TCGGGCGGCG TGGCCGGGGC CAACGTCTTC GTGCGCGGCT TCCCCGCCAC GGGCGACGCC GAGTTCCTGA CCATCCAGCT GCAGGGCTCG CCGATCTATC CGCCCTCGAC CCTGTCGTTC CTCGAGAACA GCTCGATCTT CCGGGTCGAC GAGACCATCT CGCGGATGGA GGCCCTGCGC GGCGGCCCCA ACCCGATCTT CTCCAACGGC CAGCCGGGCC TGACCACCAA CTTCCAGCTC AAGGAAGGCG GCGAGGAGAC TCATGGCCTG GTCAAGATCT CGACCTCCGA CTACGACCTG CGCCGCGTCG ACGGCCTGCT GAGCGGCAAG CTGGCCGACG ACCTCTATTT CATGATCGGC GGCTACGCGA CCACCTCGCC GGGCGTGCGC GACACCCAGT TCGACAGCGA GGTCGGCCAG CAATTCACGG TCAACATCAC CAAGCAGATG GAGCACGGCA AGCTCAACCT CTACGCCCGC TACACCGACG ATCACGGGGC CTGGTACCTG CCGTTCGCCA TCAACGTGCC TGGCGTCGAC AAGGGCGAAT ACACCCAGCT GGGCAACGCC AGCCGCTTCC ACACCCTGCA GATCAACGCC GCCGGGACGA CCCGCAATTT CGACCTGGCC GACGGCCGGG GTTTCAAGGG CTATGTGGCC GGCGGAAGCT TCGAGCACGA GTTCGGGGAC GACTGGACGG TGCGCGACCG CTTCAGCGTC ACCGACGGCG ACGCCAACAC CTATGGCCTG GTGGGCGACG GCGCGGCGGT GACCGTGGCC GCGCTCAACG CCGTGGTCCC GGGCGCGATC AAGACCCGCG GCGGGGCGAC CCTGGCCTCG ACCGACTACG TGCAGAACTG GGGCGCCTGG ATCGTCGAGA AGAAGATCAA GGCGGTCACC AATGACCTGT CGATCGCCAA GACGGTGGGC GCGCATCAGC TGTCGGCCGG CTATTACGCC TCCAGCTTCA AGTCCGACGA CTTCTGGACG ATCGGCAATG TCGAGCCGAT GCAGGTCAAG GCCAACGGCG ATTATCTGGC CGCCCCGGTC ACCTGCGCCG ACCTGGCCAC GGCCGGCAGC ACCTCCAGCT GCTTCAAGTT CGGCCTGACC TCGGCCGGCG ACGGACGGGT GGACGCCCTG TACCTGGCCG ATTCCTGGCA GGTGATCGAT CCGCTGCGCA TCGACCTGGG CGTGCGCCGC GAGCGCTTCC GGACCGACTA CGTGGTCGAT GACGGCCCCG GCTTCCCCGA CGGCCTGGCC CTGCGCACCA CCGACTACAG CAACAGCAAG ACCAGCTACA CGGTCGGCGT GAACTACGAC ATCAACGCCG TCTCGGGCGT GTTCGGCCGC TATTCGCGCG GCTACAAGTT CCCCAGCTTC GACAACTTCC GCGAAGGCCT GACCGACACG CTCAGCGTCG ACCAGTATGA GCTGGGCTAC AAGCTGCGCA GCGGGCCGTT CGAGCTTTAC GCCACAGGCT TCGCCAACGA ATTCAAGGGC GCCAAGTTCG CCGACGTCGG CGGCATCCAG GAGAGCAACA GCAACAAGGC CCACGGCGTC GAGCTGGACG GCCGCTGGCG TTCGGACTTC GGCCTGTCCC TGGCCCTGAA CGGCACCTGG CAGAAGACCG AGATCACCAA GTCGAGCATT CCGGCCAACA AGGGCAACAG CGCCCAGCGC CAGCCCGACT GGATGATCCG CTTCACCCCC AGCTATGACG TGACCCTGGG TTCGGTGGAA TCGACCTTCT ACGGCACGGT CAGCGCGGTG GACGATCGCT TCGCCGACAA CGCCAACACC CAGGTGCTGA AGGGCTACAC CAAGATCGAC CTGGGCGCGA TCTTCGACGT GGCGGACTTC ACCGTCCAGG TCTCGGCCGA CAACCTGACC GACAGCCACG GCCTGACCGA GGGTGATCCG CGCTCGACCA GCGGGGCCAA CGCCCGCCCG ATCCTGGGCC GGTCGTTCAA GGTGAGTGTC GGCTACAACT TCTGA
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Protein sequence | MRRSFDRRLD RRLIGGSTAV AALMLLAAPV AVQAQQAFQQ TRGATYSFDI PSQDLSGALR AFGQASGQQL AFDEASVRGK RAPALQGSYT AEAALKRLLS GAGLSAQPTA SGVYAIRAKT LLVATSAQAE ARPAAAAEPD PETPSQVEEV IVVGTPGGKG IDKLSASFAV TTVNADDITK ASPKSTAELL TLVPGVWVET SGGVAGANVF VRGFPATGDA EFLTIQLQGS PIYPPSTLSF LENSSIFRVD ETISRMEALR GGPNPIFSNG QPGLTTNFQL KEGGEETHGL VKISTSDYDL RRVDGLLSGK LADDLYFMIG GYATTSPGVR DTQFDSEVGQ QFTVNITKQM EHGKLNLYAR YTDDHGAWYL PFAINVPGVD KGEYTQLGNA SRFHTLQINA AGTTRNFDLA DGRGFKGYVA GGSFEHEFGD DWTVRDRFSV TDGDANTYGL VGDGAAVTVA ALNAVVPGAI KTRGGATLAS TDYVQNWGAW IVEKKIKAVT NDLSIAKTVG AHQLSAGYYA SSFKSDDFWT IGNVEPMQVK ANGDYLAAPV TCADLATAGS TSSCFKFGLT SAGDGRVDAL YLADSWQVID PLRIDLGVRR ERFRTDYVVD DGPGFPDGLA LRTTDYSNSK TSYTVGVNYD INAVSGVFGR YSRGYKFPSF DNFREGLTDT LSVDQYELGY KLRSGPFELY ATGFANEFKG AKFADVGGIQ ESNSNKAHGV ELDGRWRSDF GLSLALNGTW QKTEITKSSI PANKGNSAQR QPDWMIRFTP SYDVTLGSVE STFYGTVSAV DDRFADNANT QVLKGYTKID LGAIFDVADF TVQVSADNLT DSHGLTEGDP RSTSGANARP ILGRSFKVSV GYNF
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