| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0091 |
|---|
| Symbol | |
|---|
| ID | 5897803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 102593 |
|---|
| End bp | 103198 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641560574 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001681727 |
|---|
| Protein GI | 167644064 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.043222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAG CGCAAGTCGG CCGGTCGCCT TTCGATCCGG TCCGTGACGA GACCTTCAAG
AAAGAGCTCG TCACGCTCAT TCCGCATCTG CGCGCTTTCG CCCGCACCCT GACCGGCGAC
CCCACCGCCG CCGACGATCT GGCGCAGGAC GCGATGATGA AGGCCTGGGA CGCCCGGGCC
AGTTTCCAGC TGGGCACCAA CATGAAGGCC TGGACCTTCA TGATCCTGCG CAACCAATTC
TATTCGGAAA AGCGGCGGTC CTGGCGCCAG AGCCAGCTCG ACCAGGAAGC GGCCGAACGC
ACCCTCGTGG CGGTCGACGA CCCGGAAGCG CCGGTGGCCC TGGACGAGCT TCGGCTGAGC
CTGGCGATGC TGCCGCCCGA GCAGCGGGAA GCCCTGATCC TGGTGGGAGC CGGCGGTTTC
GCCTACGAGG AAGCCGCCGA AATTTGCGGC TGCGCCGTGG GCACCGTGAA GAGCCGTGTC
AGCCGGGCGC GGCGGGCCTT GCAGGCGATC CTCGAAGCCG GCGCCTATGA CCGCGACGGC
GGCGCCGCCG GCGACGCCAT GTACGCCATC TTGGCCGACG CGGAGAGACT GAGCACCCTG
CGGTGA
|
|---|
| Protein sequence | MTEAQVGRSP FDPVRDETFK KELVTLIPHL RAFARTLTGD PTAADDLAQD AMMKAWDARA
SFQLGTNMKA WTFMILRNQF YSEKRRSWRQ SQLDQEAAER TLVAVDDPEA PVALDELRLS
LAMLPPEQRE ALILVGAGGF AYEEAAEICG CAVGTVKSRV SRARRALQAI LEAGAYDRDG
GAAGDAMYAI LADAERLSTL R
|
|---|
| |