Gene Caul_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0084 
Symbol 
ID5897796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp98591 
End bp99457 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID641560567 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_001681720 
Protein GI167644057 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0847561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCTC GCATGCGTGT GGAAGTGATC GTCAATATCG CCTCGGGTTC GGTGGGCAAG 
GACGCGCCGG CCCAGGCCGA GGCGATCCTC GCCGCGCACG GGGTCGAAGG TTCGGTGCAT
GCGCCGGCCG AGGGCGAGCT CACCGCCTGC CTCCGCGCGG CGATCGCGCG ACGCCCCGAC
GCCCTGCTGA TCGTCGCCGG CGACGGCACC GCCCGCACCG CGGCCGAGAT GGCCGGTCCC
GACGGTCCGT TGATCGCGCC CCTGCCCGGC GGCACGATGA ACATGCTGCC CCACGCGCTA
TACGGCGCCA TTCCCTGGCC CGAGGCGATG GCCAACTGCC TCAAGGACGG CGGCGGCAAG
GAACGGATGA TCTCCGGCGG CGAGGTCAAC GGCCGCGTAT TCTTCGTCGC CGCCATCCTC
GGCAGCCCCG CCCTTTGGGC CGAAGCCCGC GAGGCGGCGC GCGCCGGCCG GGCCGACCTG
GCCTTGATGC GCGCCCAGAG GGCCCTGCGC CGGGCGTTCT CCCACCGCCT GCGCTACGTG
CTGGACGGCC GGCCCAAGGG CAAGACCGAG GCGCTCAGCC TGATGTGTCC CCTGGTCTCC
GCCAAACTGC GCGAAGACGA GCAGGCGCTG GAGGCCGCGG CCGTCGATCC GGCCAACGCG
CTGGACATCT TCCGGCTGGG GGTCAACACC GTGACCGGCA ACTGGCGCAA CGACCCGTCG
GTGATCGTCG GTCGCTGCCG AACCGGCAAG GTCTGGGCCG GCGGGCGCAT CCCCGCCATC
CTCGATGGCG AACCGGTAAG GCTGGACGAT ACGGTTTCCA TCCGCTTCCG CCCCAAGGCC
TTCCGTGCGC TAGTCCCCGC CGCATGA
 
Protein sequence
MDSRMRVEVI VNIASGSVGK DAPAQAEAIL AAHGVEGSVH APAEGELTAC LRAAIARRPD 
ALLIVAGDGT ARTAAEMAGP DGPLIAPLPG GTMNMLPHAL YGAIPWPEAM ANCLKDGGGK
ERMISGGEVN GRVFFVAAIL GSPALWAEAR EAARAGRADL ALMRAQRALR RAFSHRLRYV
LDGRPKGKTE ALSLMCPLVS AKLREDEQAL EAAAVDPANA LDIFRLGVNT VTGNWRNDPS
VIVGRCRTGK VWAGGRIPAI LDGEPVRLDD TVSIRFRPKA FRALVPAA