| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0048 |
|---|
| Symbol | |
|---|
| ID | 5897760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 61063 |
|---|
| End bp | 61941 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641560531 |
|---|
| Product | siroheme synthase |
|---|
| Protein accession | YP_001681684 |
|---|
| Protein GI | 167644021 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
|---|
| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.16033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATTCTT TCCCCGCCTA CTTCCCCCTG GCCGGCCGCA AGGTCGTGAT CGCCGGCAGC
GGCGAGGCCG CCGACAACAA GGCTCGGCTG TTCGACGGAT CGCCGGCGAC GCTAGTGCGG
GTGGACGGCC ACGCCGCCTT CCTGCCCGGA ACCTATGCCG GCGCCGTGCT GGCCTTCGTG
GCGGGCGACG ACGAGGTGTT CCTGCAAGCG GCGGCCAGCG CGGCCCGTGC GGCCCGCGTG
CTGGTCAATG TCGTCGACAA GCCGGCGATG AGCGACTTCA ACACCCCGGC GGTGATCGAT
CGCGGCGAGG TGGTGGCGGC GGTCGGCACC GGCGGCGCCT CGCCGACCCT GGCCACCAAG
CTGCGCAACG ATATCGAGGC CCAGGTGCCC GAAGGCTCGG GCCGGGTGGC GGCCCTGCTG
CGCAAGTTCC AGGACGAGGT GCGCGGCGCC CTGCCGGCCT TGCACGAACG CCGGGCCTTC
CTGCGCGACG CCGTGGTCGG CGAAGCGGCC CAGGCGGCCA TGGCCGGCGA CATGGAGACG
GCGGGGACGC TGTTCCGCCA AGCCCTGGCC AAGGGCGTCG GCCGCGAAGG CAAGGTGCGG
TTCATCGCCG GCAAGGGACC CGCGGACCTG TTGACGCTGA GGGCGCTGAG GGCGCTGGGA
ACGGCCGACG TGCTGGTCGC GGATGAAGGC GCCGACCCCG AGGTGGTGAC CCTGGCCCGC
CGCGACGTCC ACCGGCTGAA CCCCGCCGAG ACCGACGCCG AGGCGCTGGT CAAGCTGGCC
GGCGAAGGCA AGCAGATCGT GCGGCTGATC GTGGCCCCCG TCGATCCGGC CATGGTCCAG
GCCCTGGCGG CGGCGTCTGT CGCGGTCGAG GTGATCTAG
|
|---|
| Protein sequence | MDSFPAYFPL AGRKVVIAGS GEAADNKARL FDGSPATLVR VDGHAAFLPG TYAGAVLAFV
AGDDEVFLQA AASAARAARV LVNVVDKPAM SDFNTPAVID RGEVVAAVGT GGASPTLATK
LRNDIEAQVP EGSGRVAALL RKFQDEVRGA LPALHERRAF LRDAVVGEAA QAAMAGDMET
AGTLFRQALA KGVGREGKVR FIAGKGPADL LTLRALRALG TADVLVADEG ADPEVVTLAR
RDVHRLNPAE TDAEALVKLA GEGKQIVRLI VAPVDPAMVQ ALAAASVAVE VI
|
|---|
| |