| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0033 |
|---|
| Symbol | infB |
|---|
| ID | 5897745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 39009 |
|---|
| End bp | 42146 |
|---|
| Gene Length | 3138 bp |
|---|
| Protein Length | 1045 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641560516 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_001681669 |
|---|
| Protein GI | 167644006 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.286863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AGAACGATAA CGGTCGGCCT GGTTCCAACC CTGGCGGGCG AGCGCCCATC
ACGCTGAAGC CCCGTCAGGG GTCTGTCAGC GCCGGCGTCG TGAAGCAGAG CTTCAGCCAC
GGCCGCACCA AGACGGTGGT GGTTGAAACC AAGCGCGTGC GCCCGCATGC GCCGCCGGCC
GGCAACCTTG CCGCGCCGTC CTCGGCCGAG CGCCGCCAGG GCGACGCGCC GCGTCAGCAA
TCGTCTTCGG GCGGCGGTGG TTCGTCCGCC GGCGGTCTGT CGCAAGGCGA GATGCTGGCC
CGCCAGCGCG CCATCGAGGC CGCTCGCGAA CACCAGGAAC GCCAAGCCGC CGAGCGCCGC
GCCGCCGAGG CGCGCGCCGC TTCGGAAGCC GCCGCCGCTC GCGACGCCGC GGCCAAGTCG
GCCGCCGCCG CCAAGGCCGC CGCCGCTCCG GCTCCGGAAG CGCCCGCCGC TCCGGCTCCG
ACGCCCGCGC CGGTCGCTCA GGCGCCAGCC GCGCCGGTGG TTCAGGCCCC CGTCGTCGCC
GCCCCGGTCC AGGCTCCGGC CGCTCCGGTC GCCGCCGCGC CGGCCGCGCC GCGCGCCGAG
GCTCCCCGCC CCGCCCCGCC GCCGGTTCGC AGCGATGCGC CGCGTCCGGC TCCGACCGCG
GGTCAGACCC GCACCTACGA GCCCAGCCGC GACCGTCGCG ACGACCGCTC GTCGACCACC
ACCTATCGTC CGGGTCCTGG CGCTCCGCCG CAAGGCGATC GTCCCCAGGG CGACCGTCCG
CAAGGCGATC GGCCGTTCAA CCAGCGCGCC CCGCGCCCGG ATGGCCCTTA CAACCAGCGC
ACCCCGCGTC CCGACGCCGG CGGTCCGCCG CGCGGTCCCC GGCCCGAAGG GGCTGGCGGC
TTCCGCAACG ACCGCCCGCA GGGCGACCGG CCGCAAGGCG ATCGTCCCCA GGGTGACCGT
CCGCAAGGCG ACCGCCCGAC CCAGACCGTG CGCTATTCGG CCCTGGCCCC GCGCCCGGCG
CCCGGCGCCC GTCCGGGTCC TGGCGGTCCA CGCGGCGCCC GTCCGGGCGT CCCGGCCTCG
GCTCCCGCCA CCCCCGAGAT CCAGCGCGCC ACGCGTTCGG CTCCCCGCCC CGGCGGCGAC
GTTGGTCGCA AGCCCGAGGA GGACGATGAC CGCCGCAAGG CCGCGGCTCC CGGCAAGGCC
GTCAGCCGCG CCAAGGGCGC TCCGATCCGT CGGGAAGGTC GCCTGACCAT CCAGACCGTG
GCCGGCGATG GAGACTCCGC CGACCGCATG CGCTCGCTGG CCTCGGTTCG CCGGGCCCGT
GAACGTGAAA AAGAAAAGCG CCGCGGCGGC CCCGCCGATG TGGTCAAGGT CGCCCGCGAA
GTGATTATTC CCGACGTCAT CACCGTGCAG GAGCTGTCCA ACCGGATGGC CGTGCGTGGT
GTCGAGATCA TCAAGTTCCT GATGCGTCAG GGCGTGATGC TGAAGATCAA CGACGTCATC
GACAACGACA CCGCCGAGCT GGTGGCGACC GAATTTGGTC ACACCGTGCG CCGCGTGTCG
GAAGCCGACG TCGAAGAAGG CTTCATCGGC GCCGAGGATG TGGACGATCA CCTGGAGCCC
CGGCCCCCGG TCGTCACCGT CATGGGTCAC GTCGACCACG GCAAGACCAG CCTGCTGGAC
GCGCTGCGCA AGGCCGACGT GGCCAGCGGC GAGCACGGCG GCATCACCCA GCACATCGGC
GCCTACCAGG TGCGTCTGGA AAGCGGCCAG AAGGTCACCT TCCTCGACAC CCCGGGCCAC
GCGGCCTTCT CGCAAATGCG GGCTCGCGGC GCCAATATCA CCGACCTGGT GATCCTGGTG
GTGGCCGGCG ACGACGGCGT CATGCCGCAG ACCGTCGAGG CCATCAAGCA CGCCCGCGCC
GCGGAAGTGC CGATCATCGT GGCCGTCAAC AAGATGGACA AGCCCGGCGC CGACTCCACG
CGGGTCGTCA ACGAGTTGCT GCAACACGAG ATCGTGGTCG AAAGCCTGGG CGGCGACACC
CAGATCGTCG AAGTCTCGGC CAAGACCGGC CAGGGCCTGG ACGAGCTGAT CGAACGCATC
CTGCTGCTGG CCGAGGTCAT GGACCTGAAG GCCAACCCCG ACCGCACCGC CGACGGCGTG
GTGATCGAGG CCAAGCTGGA CAAGGGCCGC GGCGCTGTCT CCACCGTGCT GGTCAAGCGC
GGCACGCTGA AGCGCGGCGA CATTGTCGTG GCCGGCAGCC AGTTCGGCCG GGTTCGCGCC
CTGCTGAACG AGCGCAACGA GCAACTGACC GAAGCCGGTC CCGCCACCCC GGTCGAGATT
CTCGGCCTGG ACGGCGTGCC GTCGCCCGGC GACCCCTTCG CGGTCGTCGA GAACGAGGCC
CGGGCTCGCG AACTGACCGA GTACCGCATC CGCCTGAAGC GCGAGAAATC GATGCATCCG
GTCGGCGCGG GCGCCACCAG CATGGCCGAC ATGATGGCCA AGCTGCAGGA CAAGAAGTAC
CGCGAACTGC CGTTGGTCAT CAAAGCCGAC GTGCAGGGTT CGGCCGAGGC GATCATCGGT
TCGCTGGACG CCATGTCGAC CGACGAGGTC CGCGCACGGA TCATCCTGTC GGGCGCCGGG
GCGATCAGCG AAAGCGACGT GATGCTGGCC AAGGGCGCCG GCGCCCCGCT CATCGGCTTC
AACGTCCGGG CCTCGGCCCA GGCGCGGGCG CTGGCCGAGC GCGAAGGCGT CGAGATCCGC
TACTACGCGA TCATCTACGA CCTGCTGGAC GACATCAAAG GCGTGCTCTC GGGCATGCTG
GCGCCGATCC AGCGCGAAAC CTTCCTGGGC AACGCCGAAG TGCTGCAAGC CTTCGACATC
TCCAAGGTCG GCAAGGTCGC CGGTTGCCGC GTCACCGAGG GCGTGGTCCG CAAGGGCGCC
AAGGTCCGGA TCATCCGCAA CGACATCGTC GTTCTGGAAC TGGGCACCCT GCAGACCCTC
AAGCGCTTCA AGGACGAGGT CCCCGAGGTC CCGTCCGGCC AGGAGTGCGG CATGATGTTC
GCCGGCTTCC AGGACATCAA GGTCGGCGAC ACCATCGAGT GCTTCACCGT CGAAGAGATC
AAGCGCCAGC TCGACTAA
|
|---|
| Protein sequence | MSDENDNGRP GSNPGGRAPI TLKPRQGSVS AGVVKQSFSH GRTKTVVVET KRVRPHAPPA
GNLAAPSSAE RRQGDAPRQQ SSSGGGGSSA GGLSQGEMLA RQRAIEAARE HQERQAAERR
AAEARAASEA AAARDAAAKS AAAAKAAAAP APEAPAAPAP TPAPVAQAPA APVVQAPVVA
APVQAPAAPV AAAPAAPRAE APRPAPPPVR SDAPRPAPTA GQTRTYEPSR DRRDDRSSTT
TYRPGPGAPP QGDRPQGDRP QGDRPFNQRA PRPDGPYNQR TPRPDAGGPP RGPRPEGAGG
FRNDRPQGDR PQGDRPQGDR PQGDRPTQTV RYSALAPRPA PGARPGPGGP RGARPGVPAS
APATPEIQRA TRSAPRPGGD VGRKPEEDDD RRKAAAPGKA VSRAKGAPIR REGRLTIQTV
AGDGDSADRM RSLASVRRAR EREKEKRRGG PADVVKVARE VIIPDVITVQ ELSNRMAVRG
VEIIKFLMRQ GVMLKINDVI DNDTAELVAT EFGHTVRRVS EADVEEGFIG AEDVDDHLEP
RPPVVTVMGH VDHGKTSLLD ALRKADVASG EHGGITQHIG AYQVRLESGQ KVTFLDTPGH
AAFSQMRARG ANITDLVILV VAGDDGVMPQ TVEAIKHARA AEVPIIVAVN KMDKPGADST
RVVNELLQHE IVVESLGGDT QIVEVSAKTG QGLDELIERI LLLAEVMDLK ANPDRTADGV
VIEAKLDKGR GAVSTVLVKR GTLKRGDIVV AGSQFGRVRA LLNERNEQLT EAGPATPVEI
LGLDGVPSPG DPFAVVENEA RARELTEYRI RLKREKSMHP VGAGATSMAD MMAKLQDKKY
RELPLVIKAD VQGSAEAIIG SLDAMSTDEV RARIILSGAG AISESDVMLA KGAGAPLIGF
NVRASAQARA LAEREGVEIR YYAIIYDLLD DIKGVLSGML APIQRETFLG NAEVLQAFDI
SKVGKVAGCR VTEGVVRKGA KVRIIRNDIV VLELGTLQTL KRFKDEVPEV PSGQECGMMF
AGFQDIKVGD TIECFTVEEI KRQLD
|
|---|
| |