Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0028 |
Symbol | trmB |
ID | 5897740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 34182 |
End bp | 34862 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641560511 |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_001681664 |
Protein GI | 167644001 |
COG category | [R] General function prediction only |
COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.125198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.674789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCATC CCCAACAGCC CCACGGGCCG CTGCGCTCGT TCGGCCGCTT GAAGTCGCGG CCGGTGAAGC CGCGCCAACA GGCCCTGCTC GACACCCTGC TGCCGCAGAT CGCCGTGCCG ACCGCGCCGT TCCAGCCCCG CGACCTGATG CCGGAAGCCC AGGAAGTCTG GCTGGAGATC GGCTTTGGCG GCGGCGAGCA CATGGCGGCC CAGGCCGGCA AGCGCCCTGA CGTGCTGATG ATCGGGGCCG AGCCCTTCGT CAACGGCGTG GCCAGCGCCG TGCGTCACGT CGAGGAGCAG GCCTTGAAGA ACGTCCGCAT CCACGAGGGC GACGCCCGCG ACGTGGTCGG GTGGCTGCCG GACGCCAGCA TCGACCGCCT CTTCATCATG TTCCCCGACC CCTGGCACAA GGCGCGGCAC AACAAGCGCC GCCTGGTCCA GCCGGCGTTC GTGGCCGAGC TGGCGCGGGT GCTGAAACCG GGCGCGGGCT TCCGCTTCGC CACCGACTGG GCCGACTACG CCCAGTGGAC GGTCGAGCGG GTGCTGGCCG ATCCGGCCTT CCGGTTCGCC GACGCGGAGG CCGTCCGCAA CGCCCCGCCC GCCGACCACG TCACCACGCG GTACGAGGAA AAGAAGCTGG GCGACTGCGC GCCGGTGTTC TTGGACTTCG TCAGGATCTG A
|
Protein sequence | MTHPQQPHGP LRSFGRLKSR PVKPRQQALL DTLLPQIAVP TAPFQPRDLM PEAQEVWLEI GFGGGEHMAA QAGKRPDVLM IGAEPFVNGV ASAVRHVEEQ ALKNVRIHEG DARDVVGWLP DASIDRLFIM FPDPWHKARH NKRRLVQPAF VAELARVLKP GAGFRFATDW ADYAQWTVER VLADPAFRFA DAEAVRNAPP ADHVTTRYEE KKLGDCAPVF LDFVRI
|
| |