Gene Caul_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0012 
Symbol 
ID5897724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp20020 
End bp21054 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content68% 
IMG OID641560495 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001681648 
Protein GI167643985 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00178071 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC ACACCCCTGT TCCCTACACG GGTCCGACCC GCGTGCTCTC CGGCGTCCAG 
CCGTCCGGCG CCCTGCACCT GGGCAACTAT CTCGGCGCCC TGGTGAAGTT CGCCAGGCTG
CAGCACGAGA TGGACACCTT CATCTTCGTG GCCGATCTGC ACGCCATCAC CGTCTGGCAG
GACCCCGAGG CCCTGGCCCA ACAGACCCGC GAGATCACCG CCGCCTATCT GGCGGCCGGC
CTGGATCCGA AGAAGGCCAC GATCTTCCCG CAGTCGGCGG TGCGCGAGCA TTCCGAACTG
GCCTGGATCT TCCAGTGCGT GGCGCGCCTG GGATGGCTGG ACCGCATGAC CCAGTTCAAG
GAGAAGAGCG GCAAGCACAA GGAGCGCTCC AGCGTCGGCC TCTACACCTA TCCGGTGCTG
CAGGCCGCCG ACATCCTGGT CTACAAGGCC ACCCACGTGC CGGTGGGCGA GGACCAGAAG
CAGCATCTGG AGCTGACCCG CGACATCGCC GGCAAGTTCA ACCACGACTT CGGCGTGCAG
GGCTTCTTCC CGCAGCCCGA GCCCCTGATC CAGGGGCCGG GCGCGCGGAT CATGAGCCTG
CGCGACGGCT CGGCCAAGAT GAGCAAGTCC GACCCGTCGG ACTATAGCCG CATCAACCTG
ACCGACACCG CCGACGACAT CGCCGCCAAG GTCCGCAAGG CCCGCACAGA CCCGGAACCG
CTGCCCGAGA CCCTGGAGGA GCTGGCCGCC CGGCCCGAGG CTGACAACCT GGTCGGCATC
TTCGCGGCGC TGTCGGGGAA GACCAAGGCC GAGGTGCTGG CCGACTATGC CGGCAAGGGC
TTTGGAACCT TCAAGCCGGC CCTGGCCGAC TTGGCGGTCG ACAAGCTGGC CCCGGTGGGC
GAGACGATGC GCCGGTTCCT GGCCGACCCG ACCGAGATCG ACCGCATCCT GAAGGCCGGC
GCCGAACGGG CTTCGGAGGT CGCCGCGCCG ACGGTGGCCG AGGTGAAGAA GCTGGTCGGC
TTCTGGGGGG CTTGA
 
Protein sequence
MTDHTPVPYT GPTRVLSGVQ PSGALHLGNY LGALVKFARL QHEMDTFIFV ADLHAITVWQ 
DPEALAQQTR EITAAYLAAG LDPKKATIFP QSAVREHSEL AWIFQCVARL GWLDRMTQFK
EKSGKHKERS SVGLYTYPVL QAADILVYKA THVPVGEDQK QHLELTRDIA GKFNHDFGVQ
GFFPQPEPLI QGPGARIMSL RDGSAKMSKS DPSDYSRINL TDTADDIAAK VRKARTDPEP
LPETLEELAA RPEADNLVGI FAALSGKTKA EVLADYAGKG FGTFKPALAD LAVDKLAPVG
ETMRRFLADP TEIDRILKAG AERASEVAAP TVAEVKKLVG FWGA