Gene Caul_5281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5281 
Symbol 
ID5897439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp222557 
End bp223783 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content68% 
IMG OID641555384 
Productbeta-lactamase 
Protein accessionYP_001676715 
Protein GI167621930 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0166031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCGC TTGTCACCGC CACGCCCGAA GAGGTTGGGC TGTCGACCGA GGGGCTGGCC 
CGGGTCAACG CCGTTGTCCA GGCCGAGATC GACGCGGGGA CCCTGGCCGG AGCCGTCACC
TTGGTCGCGC GTCATGGACA GGTCTGCCAG GTCCAGGCGA TGGGCGCTCA GAACATCGCA
GCGGGCCAGG AAAGCCGCGT CGATGGGATC TACCGGATCT TCTCGATGAC CAAGCCGGTG
ACGGCGGTGG CGATGATGAT CCTCTGGGAC CAAGGGCTAT GGAGCCCTGA GGATCCGATC
GCCAAGCACC TTCCCGAGTT CGCCGACGCT CAGGTCCTAG ACCACCTCGC ACCGGACGGC
GCGACGCGCC TGCAACCGGC CGCCCCGGCG CCGACCCTGC TGCATCTGCT GACCCACACC
GCCGGCCTGG GCTATGGCTC GGTGCTTTCC GATCTGAGTG ACCCGATCAA TCGCGCCTAC
CAGGACGCCC AGGTCTGGGA TGCGCCGGAT CTGGCGCAGA TGATGGCCCG TCTCGGGCGC
CTGCCCTTGG CGTTTCAGCC AGGGACCTCA TGGCGCTACA GCCTGGGCAT GGAGGTCCAG
GGCGCGCTGA TCGAACGGCT GACCGGGCAG TCCCTGCCCG ACTTCATGCA GTCGAACATC
TTCGGCCCGC TGGGCATGAT CGATACCGCG TTCCATACCC CGCCCGAGAA GGCCGATCGG
CTGGCGGCGC TGTACTTCAA GGGCGGCGAG GCTGCGTTGA CCGCCATCGC CAACCCCATG
CGCCCCGACT GCGACGCCCC ACCCAAACTG GCCATGGGCG GCGGCGGCCT GGTGTCGACG
ATCGGCGACT ACGCCCGCTT CGCCCAGATG TTGCTCAATC GCGGACAACT GAACGGCCAG
AGGATCATCT CCGCAGAGGC CGCCGCCCTG ATGATGACCA ACCACCTGCC CGACGCCCTG
ATGGCCCGTG GGTTCGTGGC CGGCCACCAG CGGATACGGC CGGGTTTTGG ATTTGGCTTC
AACGGTGTGG TGTTCACAGA TCCGTCGGCC GCCGGCGTGC CGGTCGGCCC AGGGACCTAT
CACTGGGACG GCGCGGCCGG GACCTGGTTT TGGGTGGACC CGGCCAACGA CCTGCTCTTC
GTCGGCATGA CCCAGTGTCT GTCCTACGCC GCCCCACCGC TGCAAGCGCG CACCCAGACC
TTGATGGCCG AGGCGATCCT GGCCTAG
 
Protein sequence
MGSLVTATPE EVGLSTEGLA RVNAVVQAEI DAGTLAGAVT LVARHGQVCQ VQAMGAQNIA 
AGQESRVDGI YRIFSMTKPV TAVAMMILWD QGLWSPEDPI AKHLPEFADA QVLDHLAPDG
ATRLQPAAPA PTLLHLLTHT AGLGYGSVLS DLSDPINRAY QDAQVWDAPD LAQMMARLGR
LPLAFQPGTS WRYSLGMEVQ GALIERLTGQ SLPDFMQSNI FGPLGMIDTA FHTPPEKADR
LAALYFKGGE AALTAIANPM RPDCDAPPKL AMGGGGLVST IGDYARFAQM LLNRGQLNGQ
RIISAEAAAL MMTNHLPDAL MARGFVAGHQ RIRPGFGFGF NGVVFTDPSA AGVPVGPGTY
HWDGAAGTWF WVDPANDLLF VGMTQCLSYA APPLQARTQT LMAEAILA