Gene Caul_5251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5251 
Symbol 
ID5897263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp183881 
End bp184792 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID641555354 
Product5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 
Protein accessionYP_001676685 
Protein GI167621900 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.62648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA TCACCTACCG CGCCCAGATC GACGACCGCG CCCGTCTGGG GGCGATCGTG 
GGCGACCTTG TCGTCGACCT GCAACGGCTT GGCGCGTCCC ACGGCCTTGT CGTGCCCGGC
GCCATGCTGG ACCTGATCGA CCTGGGCCCC TCGGGCCTGG CCAGCGTCGC CAAGCTGCTG
GCCGAACATC AGGGGACCTG GCCGCTCGGC GTCGCGATCG CCTTGGCCAA CGTCACGCTG
CTGGCCCCCA TCCCGCGCCC TCGCAAGAAC ATCTTCGGCA TCGGGCTCAA CTACCTCGAT
CACGTCGCCG AGTCGGCGCA GGCGCTGGAC ACCTCGCCCG ACCTGCCCAG GCAACCGGTG
GTCTTTTCAA AGCCCCCGAC TACGATCATT GGGCCGGATG CGGCGATACC CCACAACGCC
AAGATCACCC AGCAGATGGA TTGGGAGGTC GAACTGGCGG TCGTGATCGG CTCCACGGCC
CGGCGGATCG ATCGGGCGCG CGCCCTGGAC CATGTGTTCG GCTACACGGT CATGATCGAC
ATCAGCGCGC GCGATTGCCG TCGGGCGGGC CAGTGGATCT ACTCCAAGGG CCAGGACGGC
TATGGACCGA TGGGACCGAT GATCGTCACC GCCGACGAAG TTCCCGATCC GCAGAACCTG
GACCTGTGGC TAAGCGTCAA CGGCGTCGAG AAGCAGCGCT CCAACACCAG TCACATGCTG
TTCAAGGTCG ACGAACTGAT CGCCGACCTC AGCCAGGGCA TCACGCTCGA ACCCGGCGAC
ATCATCGCCA CGGGGACGCC GGACGGCGTC GGCGCCGGCC GTACGCCGCA GGAATGGCTT
TGGCCGGGCG ACGTCGTGGA GGCTCATGTC GCCACCATCG GTGCGCTGCG CAACGTCGTG
ATCGCAGCGT GA
 
Protein sequence
MRLITYRAQI DDRARLGAIV GDLVVDLQRL GASHGLVVPG AMLDLIDLGP SGLASVAKLL 
AEHQGTWPLG VAIALANVTL LAPIPRPRKN IFGIGLNYLD HVAESAQALD TSPDLPRQPV
VFSKPPTTII GPDAAIPHNA KITQQMDWEV ELAVVIGSTA RRIDRARALD HVFGYTVMID
ISARDCRRAG QWIYSKGQDG YGPMGPMIVT ADEVPDPQNL DLWLSVNGVE KQRSNTSHML
FKVDELIADL SQGITLEPGD IIATGTPDGV GAGRTPQEWL WPGDVVEAHV ATIGALRNVV
IAA