| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5221 |
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| Symbol | |
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| ID | 5897391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010335 |
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| Strand | - |
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| Start bp | 143299 |
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| End bp | 145758 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641555324 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001676655 |
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| Protein GI | 167621870 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTTC TCAACGAGTA TCGCGCGCGC TCGGGCCGGC TTTGCGATCA CCTCCCCTGG
GCGCTGCTGA TCGCGCCGGG CGTGGTGCTC AACAAGGACG GCGCCTTTCA GCAGACCCTG
GAATATCGCG GGCCGGACCT GGCCAGCGCC ACTCCAGCCG GGCTGATGGC GGTGCGGGCC
CAGCTCAACA ACGCCCTGCG CCGCCTGGGC TCGCGCTGGT GCTTGCATGT CGAAGCCCTG
CGCGCGCCGT CACAGTCCTA TCCGGCGGCG GCCTTCCCCG ACCCGGTCAG CCACATCATC
GACGAGGAGC GTCGCGCGGC CTTCGAGGCG GAGGCCGCTC ACTTCGAGAC CCGCTACTTC
CTGACCTTCA CCTTTCTGCC GCCCGACGAC GCCATCGGCC GGGCCGAAAG CCTGCTGGTC
GAGAACCTTC CTCAAGGCCG CGGGGCTCAG GCGCTCTACC GCCTGGCGCT GGACGAGTTC
GTCTCGACCG TCGGCGGCGT GCGCGAGATC CTGGCGGGCG TCTTCCCGCT GGTGCGCCGC
TTGGATGACG CCGAGACCCT GGCCTATTTG CACGCCTGCG TCTCGACCAA GGCCCAACCG
GTGTCGCCGC CCGACCCGCC GGCCTATCTC GACGCCGTCC TGACCGACGA TGATTTTCAA
GGCGGCCTCT TTCCGAGGCT GGGCGGGGCC TATCTGCGCA CCATCTCGAT CCGCGCCTAT
CCGGCCGCCT CCTGGCCCGG CATGCTCGAC CAACTCAACA GCCTGGGTGT GCCCTATCGC
TGGGTCTGCC GCTTTCTGCC TCTGGACAAG GAGGACGCCC GGCGCTCGAT CACCGCCTTG
CGCAAGCGCT GGTTCGCCAA GCGCAAAGGC ATGCTGGCCT TGCTTAAGGA GGCCATCACC
CACGAGCCGT CCCTGCTGGA GGACCCCGAC GCCCTGCAGA AGACCCAGGA CGCCGACGCG
GCCCTGATGA TCCTGGGCGG CGACGCGGCC AGCATGGGCT ACCTGACCCC GACCATCACC
CTGATCGACC GCGATCCCGA TCGCTTGGCG CTGAAGGCCA GGCTGGTCGA AGGCGTGATC
AACCGGGCCG GCTTCGTCAG CAAGCTGGAG GACCTCAACG CCGTTGAAGC CTGGTTGGGC
AGCCTGCCGG GGCAGGCCTA TGCGGATCTG CGCCGACCGC TGGTGTCCAC GCTCAATCTT
TGCGACCTGC TGCCGGTCTC GGCGATCTGG CCGGGGCCGA AGATCAACGC CCACCTCACC
GAGGAGGCGC GCAAGCAGGG CGAGCTTGGC GACCAGCCGC CGCTGATGCA TGCGCGCACG
GCGGCGACCA CGCCGTTCCG CCTGGACCTG CACCAGGGCG ATGTGGGTCA CACCTTCGTG
GTCGGGCCGA CGGGCGCGGG CAAGTCGGTG CTGCTCAACA CGCTGGCCCT GCAATGGCGG
CGCTATCCGA AGGCGCGGGT CATCATCTTC GATAAGGGCC GCAGCAGTCG CGCCGCGACC
CTCCTGGTGG GGGGCGGGTT CTACGACCTG GGTCCCGCGG GCGAAGATCT GGCCTTTCAG
CCTCTGGCCG AGATCGACCG GCCCGAGGAG CGGATCTGGG CTCAGGACTG GATCCTGGAT
CTGCTCGGCG CCGAAGGCGC GATCGTCAAC CCGGCGGTCA AGGACGAGCT CTGGGCGGCC
CTGGCCAATC TCGCCGCCGG GCCCCGCGAG CAGCGCACCC TGACGGTTTT GGCCGCCACC
ATCCAGGATC ACGCCGTCAA GGCCGCGCTC AAACCGTTCA CCCTGGCCGG CGCGCACGGC
CGTCTGCTGG ACGCGGGAAC CGAGACCCTG ACGACCCGCG ACTGGCAGGC GTTCGAGCTG
GGCGCCCTGA TGGAAAGTCC CGCCGCCCTG GCGCCGGTGC TGACCTATCT CTTCCATGTG
CTCGAGCGCG GGTTCGATGG CCGCCCGACC CTGATCGTCC TGGACGAGGC TTGGCGCTTC
TTGGAGACGA CCGCCTTCGC CAAGCGCATC CGCGAGTGGC TGTGGACGGT GCGCAAGCTC
AACGTCTCGG TGATGTTCAG CACGCTTAGT TTGTCGAGCG TCACTGACAG CCCGATCGCG
CCGGCCCTGC TCGAAGGCTG CCCCACCCGG ATTTTCCTAC CCAATCCCGA GGCCCGCACG
CCGCTCGTCG CCAAGGGCTA TGCCGGGTTT GGCCTCAACG ACCAACAGAT CGAGATCATC
GCCGCCGCCG CGCCCAAGCG CGAATATTAC TATCAGAGCG CGGCGGGCAA TCGCCTGTTC
GAGCTGGGCC TGGGCCCGGT GGCGCTCGCC GCCGTCGGCT CGGCCAGCGC CGCAGACCAG
GTGCTGATCT CCCGGCTGTT GGACACCGCG GGCCCGGGCG GGTTCGCCGC GGCCTTCTAT
CATCACAAGG GACTGGCCGA GGTCGGGGCG TTCCTGGAGG ACGCGCGCCG TGCGGCCTGA
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| Protein sequence | MLFLNEYRAR SGRLCDHLPW ALLIAPGVVL NKDGAFQQTL EYRGPDLASA TPAGLMAVRA
QLNNALRRLG SRWCLHVEAL RAPSQSYPAA AFPDPVSHII DEERRAAFEA EAAHFETRYF
LTFTFLPPDD AIGRAESLLV ENLPQGRGAQ ALYRLALDEF VSTVGGVREI LAGVFPLVRR
LDDAETLAYL HACVSTKAQP VSPPDPPAYL DAVLTDDDFQ GGLFPRLGGA YLRTISIRAY
PAASWPGMLD QLNSLGVPYR WVCRFLPLDK EDARRSITAL RKRWFAKRKG MLALLKEAIT
HEPSLLEDPD ALQKTQDADA ALMILGGDAA SMGYLTPTIT LIDRDPDRLA LKARLVEGVI
NRAGFVSKLE DLNAVEAWLG SLPGQAYADL RRPLVSTLNL CDLLPVSAIW PGPKINAHLT
EEARKQGELG DQPPLMHART AATTPFRLDL HQGDVGHTFV VGPTGAGKSV LLNTLALQWR
RYPKARVIIF DKGRSSRAAT LLVGGGFYDL GPAGEDLAFQ PLAEIDRPEE RIWAQDWILD
LLGAEGAIVN PAVKDELWAA LANLAAGPRE QRTLTVLAAT IQDHAVKAAL KPFTLAGAHG
RLLDAGTETL TTRDWQAFEL GALMESPAAL APVLTYLFHV LERGFDGRPT LIVLDEAWRF
LETTAFAKRI REWLWTVRKL NVSVMFSTLS LSSVTDSPIA PALLEGCPTR IFLPNPEART
PLVAKGYAGF GLNDQQIEII AAAAPKREYY YQSAAGNRLF ELGLGPVALA AVGSASAADQ
VLISRLLDTA GPGGFAAAFY HHKGLAEVGA FLEDARRAA
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