| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5148 |
|---|
| Symbol | |
|---|
| ID | 5897284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | + |
|---|
| Start bp | 67514 |
|---|
| End bp | 68500 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641555251 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001676582 |
|---|
| Protein GI | 167621797 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0642429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCCC GCACCATCAC CCTCCTGGCG GCTCCTGGCG TACAGCTGCT GGATGTCGCC
GGGCCGCTGG ACGTGTTCGC CGAGGCCAAC CTCCAGGCCG GCGAGACGGT CTATCGCCCA
CGGGTGGTCG GCCTGCGGCC CGGACCGATC GCCAGCTCGT CAGGCGTTCG CCTGTTGCCC
GATACGCTTG TCGGCGAGCC GATCAGCCTG CGCTCGGACA CCTTGTTGGT CGCCGGCGCG
CCGCACGCGC CCGACCTTGT CCTGAGCGAC GCCGAGAAGG CATGGCTGCG CCTGGCCGCG
GGCAAGGCGC GCCGCCATGG CTCGGTTTGC AGCGGCGCTT TTCTGCTGGC CCAGGCCGGG
CTCCTGGCCG GCCGCCGCGT GACCACCCAC TGGGCCGTCG CCGAGCGCCT GGCCGCCGCC
TGGCCCGACA TCGTCGTCGA CGCGGATGCG TTGTACGTGC GTGACGGGCG CCTGCGCACC
GCCGCCGGGG TGACGGCGGG CTTGGATTTG GCGCTGGCTT TGGTCGAGGA GGATCTGGGT
CGCGACGTCG CCGTCAAGGT CGCCGCCCAG CTGGTGATGT TCTTTCGTCG TCCTGGCGGT
CAACTGCAGT TCAGCCGGCG TGGCGAGCTG GCCCCGCAGG GTCGCTCGGC GCTGCAGGAG
GTTCAGCGTT GGATCAGCGC CCATCCCCAG GAGGATCATG CCGTTGCAAA GCTCGCCGCC
CGGGCCGGGC TCAGCCCCCG GCATTTTGCC CGCCTGTTCG TAGAAGAGAT CGGCGTCACC
CCGGCCGCCT TCGTCGAAGC CGCTCGCGTA GCCGCCGCGC GACGCATGCT CGAGGACGGC
GGCGAGGCGC CCAAGCAGGT CGCCGTCCTG TGCGGGTTCG CCGACGCCGA CGTGCTGCGC
CGCGCCTTCG TACGCCACGT GGGCGTGACG CCCGCTGAGT TTCGACGCCG CCACGGCGCC
TCGGCGCGGC AGGAGCCGAC AGCCTAG
|
|---|
| Protein sequence | MPPRTITLLA APGVQLLDVA GPLDVFAEAN LQAGETVYRP RVVGLRPGPI ASSSGVRLLP
DTLVGEPISL RSDTLLVAGA PHAPDLVLSD AEKAWLRLAA GKARRHGSVC SGAFLLAQAG
LLAGRRVTTH WAVAERLAAA WPDIVVDADA LYVRDGRLRT AAGVTAGLDL ALALVEEDLG
RDVAVKVAAQ LVMFFRRPGG QLQFSRRGEL APQGRSALQE VQRWISAHPQ EDHAVAKLAA
RAGLSPRHFA RLFVEEIGVT PAAFVEAARV AAARRMLEDG GEAPKQVAVL CGFADADVLR
RAFVRHVGVT PAEFRRRHGA SARQEPTA
|
|---|
| |