Gene Caul_5141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5141 
Symbol 
ID5897375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp60874 
End bp61773 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID641555244 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001676575 
Protein GI167621790 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT TCGTTGTTGG CGCGACCGGC TACATCGCCG GCGCCGTCAT CCAGAAACTT 
CAAGCCGCCG GCCATCAGGT GCTTGGGCAA ACCCGCTCCG CGGAAAAGGC CAAGGCTCTG
GAAGCGCTCG GCGTCACCCC GCTGGTTGGC GATCTTACCG ACGCAGAGCT TCTCGCCTCG
GGCGTGGCCG CCAGCCAGGC GGTGATCAGC CTGGCTGATT CCGACAGCTT GCCCCTGGCG
CAAGGCCTGA TCTCGGCCAT GGCCCAAAGC GGCAAAACCC TGATCCACAC CAGCGGTTCG
AGCATCGTGG TCGACGACGC ACGCGGGGCC TTCGCCAGCG ACGCCACATT TGACGACGAC
GCGCCGTTCA CGCCGATGGA TCACCGCCTG CCGCGTGTCG CGGTCGATCG GGCGATCCGC
TTGGCCGGCA TCGAGCAAGG TCTGCGTACG GCCGTCATCT GCCCCACCAT GGTCTATGGC
CAAGGTCCTG GCGTGCATGG CGTCAGCGAT CAGATCCCCA AGATCGCCGC GAAATCTCTG
GAGCGCGGGG CAGGTGTCTA TGTCGGCCAA GGCCAGAACA TCTGGTCCAA CGTCCATGTC
GACGACCTGG CCGATCTCTT CCTGCTAGCC CTGGAGCGGG CGCCGTCGGG CGCCTTCTTC
TTCGCCGAAA ACGGCGAGGC CAGCCTCAAA TCCGTCGCCG AGGCGGTCAG CCGTCAGCTG
GGCTTGGACG GACGGACCGA AAGCTGGGAT CTGGCCGAGG CCGAGGCTGA GCTGGGACCG
TGGCCGCGGG TGGCGCTGGC CACCAACTGC CGCGTCCGCG CCACCAACGC TCGCCGCGCA
CTTGGTTGGA CCCCACGTGG ACCGGCCCTC CAGGACGCCG TCCTGGTCAC GCGCGCCTAA
 
Protein sequence
MTIFVVGATG YIAGAVIQKL QAAGHQVLGQ TRSAEKAKAL EALGVTPLVG DLTDAELLAS 
GVAASQAVIS LADSDSLPLA QGLISAMAQS GKTLIHTSGS SIVVDDARGA FASDATFDDD
APFTPMDHRL PRVAVDRAIR LAGIEQGLRT AVICPTMVYG QGPGVHGVSD QIPKIAAKSL
ERGAGVYVGQ GQNIWSNVHV DDLADLFLLA LERAPSGAFF FAENGEASLK SVAEAVSRQL
GLDGRTESWD LAEAEAELGP WPRVALATNC RVRATNARRA LGWTPRGPAL QDAVLVTRA