| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5117 |
|---|
| Symbol | |
|---|
| ID | 5897281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | + |
|---|
| Start bp | 34000 |
|---|
| End bp | 34746 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641555220 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001676551 |
|---|
| Protein GI | 167621766 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGG TTCTTTCCGG CAAGACCGCG CTGGTGACGG GCGGGTCGCG GGGCATCGGC
GCGGCGATCG CCCGCGAACT GGCCGAACAA GGCGCTGACG TCGCCATCAG CTACGTCGCC
AGCGCAGATC GCGCCCACGC GGTTGTGGCC GATCTGAAAT CCAAGGGCGT TCGGGCCGAG
GCCTTCCAGG CCGACTCCGC CGACGGCGAA CAGGTCAAGA CGCTGATCGC CGATGTCGCC
GCCCAATTTG GCAAGCTGGA CATTCTGGTC AACAACGCCG GCGTCTTTCA CTACGGCGCG
GTCAACACCA CCGACCATGT CGCCGACCTG GACCGGGTCT ATGCCGTCAA CACCCACGCG
GTCATGACCG CCATTCGCGC CGCCGGTCAG ATCATGAACG AAGGCGGCCG GATCATCTCG
ATGTCGTCGG GCGTGGCCAC GCGCACGGGT GCGCCGGGTC TGGCCGACTA CGGCGCCAGC
AAGGCTGCGA TCGACGGGTT CACCCGCGGC GCGGCGCGCG ACCTGGGCCC AAAAGGGATC
ACCGTCAACG TGATCGGCGC TGGACCGGTC AATACCGAGA TGAACCCCGA AGATGGTCCC
ATCAGCGACT GGCTCAAGAG CGAAAGCGCG CTGGGACGCT ATGCGCGGGT CGAGGAGATC
GCTTCGGTCG TGGCCTTCAT CGCCTCGCCG GCCGCCAGCT ACATCACCGG CAGCATCATC
CCGGTCGATG GCGGCTACGC CGCCTGA
|
|---|
| Protein sequence | MTKVLSGKTA LVTGGSRGIG AAIARELAEQ GADVAISYVA SADRAHAVVA DLKSKGVRAE
AFQADSADGE QVKTLIADVA AQFGKLDILV NNAGVFHYGA VNTTDHVADL DRVYAVNTHA
VMTAIRAAGQ IMNEGGRIIS MSSGVATRTG APGLADYGAS KAAIDGFTRG AARDLGPKGI
TVNVIGAGPV NTEMNPEDGP ISDWLKSESA LGRYARVEEI ASVVAFIASP AASYITGSII
PVDGGYAA
|
|---|
| |