Gene Caul_5108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5108 
Symbol 
ID5897338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp26403 
End bp27353 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content67% 
IMG OID641555211 
ProductAraC family transcriptional regulator 
Protein accessionYP_001676542 
Protein GI167621757 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.310256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCG GCGCCGCGCT CCAGGTCAAA GATGAACCTT GGGGCGCGCG TTTGGCGCGG 
GAGCCGTCAG GCGGTCGCTG GCGCGAAGTC TTCGAGCCGG ACTACGTCGG CGTCACCGTC
TCCAGCGTGC AGCAAAAGAC CTGGAGCGGG CTGTCGGCGG TCGTACGCGA GCTGCGCGTG
GACGCGCCGT TCGACGTGGA ATGCACCGCC GACTTCTCCC GTCTGCTCGT GGTCCTCGAC
GAGGTGGGCG GACGTATGCG TGGCCGGACC ACCAAGAGCT GCTCGCCTGA TAATCCGCCG
ACCAACGCGA TGTATTTCGT TCCGGCCGGC GCCCAGGTTT GGCAGTGCGC CAATCAGCTG
CGCTACATGC GCCACATCAG TTTGCAGTTT GACGCGGCGT CCCTGGACCA GTTGCTCGGC
GAGGCCGCGC CGGCTCTGCC CGACGGACCC CGAATGGGAT TTTCCGATCC AAGCCTGTTG
GCGATCGCCA GACTGTTCGA GGCTGAATGC CAGAGCGAGC GTCCAGCCGA CCTGTTGTTT
GGAGACGGCC TGTCGCTCAG TCTCTTGTCG GCGCTGGGGC GTCTGGCCCA GGTTCCAAGC
CAGCGGCCCG CTGGACGGGG CGGGTTGACG CCGCGCCATC TCAAGCAGGT CATCGACTAT
ATGGATGCTC ACCTTGGCGA GGCGATCAGT CCCCGTGATC TTGGCGACTT GGTCCACTTC
TCGCCCTCGC ACCTGGGACG GGCCTTCAAG GTCTCGATGG GCGTGTCGCC CTACGCGTGG
CTGATCGAAC GCCGGGTGCG GCGGGCCGCG GAGTTGTTAC TGGATCCGCA GCGCTCCATC
GCCGAGGTCG CTCTGGCGGT CGGGTTCTCC GACCAACCGC ACTTTACGCG CGCCTTTGCG
CGCGTTTTTG GCGCCAGCCC CGGCGCATGG CGCCGCCAGT CCCTGGCCTA G
 
Protein sequence
MSLGAALQVK DEPWGARLAR EPSGGRWREV FEPDYVGVTV SSVQQKTWSG LSAVVRELRV 
DAPFDVECTA DFSRLLVVLD EVGGRMRGRT TKSCSPDNPP TNAMYFVPAG AQVWQCANQL
RYMRHISLQF DAASLDQLLG EAAPALPDGP RMGFSDPSLL AIARLFEAEC QSERPADLLF
GDGLSLSLLS ALGRLAQVPS QRPAGRGGLT PRHLKQVIDY MDAHLGEAIS PRDLGDLVHF
SPSHLGRAFK VSMGVSPYAW LIERRVRRAA ELLLDPQRSI AEVALAVGFS DQPHFTRAFA
RVFGASPGAW RRQSLA