| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5105 |
|---|
| Symbol | |
|---|
| ID | 5897297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | + |
|---|
| Start bp | 21425 |
|---|
| End bp | 22471 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641555208 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001676539 |
|---|
| Protein GI | 167621754 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTATC GATCCAAATT CACTGTCGCC GCCGTGCTAG GAAGCTTGGC GCTCCCCCTC
GCGGCCTGCG GCGGCCACAA GGAAGCGGCT GATCCGCGCA CGGAGGTCCC GCTGGTTCGC
GTGGCGACCG CCGGCGGCGC GGCCAAGGCC GAGCGCGGCT TCTCCGGCGT CGTCACCGCC
CGCGTCCAGA GCGATCTGGG CTTCCGTGTC CCAGGCAAGG TCATCGAGCG TCTGGTCGAC
GCCGGCCAGA CCGTGCGCCG CGGCCAACCG CTGATGCGGA TCGACCGCAC CGATTACGCC
CTTGCCCTGG ACGCCATTCG CGCGCGGGCC CAACAAACCG CCGCCGATGA AAAGCGCTAT
CGCGATCTGG TCGCGGTCGG CGCGGTCTCG GCTTCGGCCT ACGACCAGAT CAAGGCCGCC
GCCGACGCGG CTCAAGCCCA GATGCGCGCC GCGCAAAACG AGGCCAACTA CGCCCTGCTC
GTGGCCGACG CCGACGGCGT CGTCGTCGAG ACCCTGGCCG AGCCCGGCCA GGTCGTGACG
GCCGGTCAAA CCGTTGTGCG CCTGGCGCAC GCCGGCGCCC GCGAAGCCAA GATCAGCTTG
CCGGAAACCG TGCGCCCGCA GATCGGCTCG TCGGCGACGG CGGTGCTGTT CGATGGCGGT
CAGATCAGCT CCGCGCACCT GCGACTGCTC TCGGACGCGG CCGACCCTCA GACCCGCACC
TTCGAAGCGC GCTATGTCCT GGAGGGCCAG GCGGCCAGCG CTCCACTCGG CGCGACCGTG
CAGATTTCCC TTCCCGACAC CCGCTCTGGC GCGGCGCTGC AGGTGCCGCT GGCGGCCATC
TATGACACCG GCAAGGGCGC CGGGGTTTGG GTTGTCGATC CGGCCAAGTC GGTTGTCGTC
TGGCGTCCCG TGCAACTGAC CGGCCTGTCG GAAGAAACCG CGACCGTCGC CAGCGGCCTG
TCGTCGGGCG AACGTTTCGT GGCCTTGGGC GCGCACCTCC TGCATGCCGG CCAGAAGGTC
CGCGTCCAAA CCGGAGCGGC CCAATGA
|
|---|
| Protein sequence | MSYRSKFTVA AVLGSLALPL AACGGHKEAA DPRTEVPLVR VATAGGAAKA ERGFSGVVTA
RVQSDLGFRV PGKVIERLVD AGQTVRRGQP LMRIDRTDYA LALDAIRARA QQTAADEKRY
RDLVAVGAVS ASAYDQIKAA ADAAQAQMRA AQNEANYALL VADADGVVVE TLAEPGQVVT
AGQTVVRLAH AGAREAKISL PETVRPQIGS SATAVLFDGG QISSAHLRLL SDAADPQTRT
FEARYVLEGQ AASAPLGATV QISLPDTRSG AALQVPLAAI YDTGKGAGVW VVDPAKSVVV
WRPVQLTGLS EETATVASGL SSGERFVALG AHLLHAGQKV RVQTGAAQ
|
|---|
| |