Gene Caul_5098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5098 
Symbol 
ID5897368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp15884 
End bp17020 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content67% 
IMG OID641555201 
Productmajor facilitator transporter 
Protein accessionYP_001676532 
Protein GI167621747 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGG CGGTGCTCAT CCTGACCCTC AGCACCTTCG CCTTGGGGAC CTCCGAATTC 
GTGATCATGG GCCTGCTGCC CGGCGTGGCG CGTGATCTGG ACGTTTCGAT CCCCGCCGCC
GGCTGGATCG TCACCGCTTA TGCCTTGGGC ATCGCGTTGG GAGGGCCGAT CATGGCCCTT
GCCACCGCGC GCATGCCTCG TAAGCGCGCG CTTCTGGTGT TGATGGGCCT GTTCGTTTTG
GGCAACGCCC TTTGCGCCCT GTCGCCGAAC TATAGCTTGC TGCTGCTGGC GCGCGTCGTC
ACAGCGATGG GTCAGGGATC ATTCTTTGGG ATCGGCGCGG TGCTGGCCGC CAGCCTGGTG
CCCGACCATC GCAAAGCCAC GGCCATCGCC ACGATGTTCG CGGGCTTAAC CCTGGCCAAC
GTCGCTGGCG TGCCACTGGG CACCGCGCTG GGTAATTGGG CCGGCTGGAG AGCGCCCTTC
TGGGCGATCA CCGCCTTTGG CCTGCTGGCC CTGGTGGGTC TTGCAGCCAT CCTGCCGCTT
CGCCGCGATG AGGAACACGC CGATTTCATC GCCGAGTTTC GGGCGCTCAG CGATGGCCGG
ATCTGGGCGG CGCTCGGCAC GACGGTGTTG TTCACCGCGT GCGCCTTTCC ACTGTTCACC
TACATCGTGC CAATGCTCGA GGACGTCACG GGCGTCTCCG CCGCCGGCGT GACGATCAGC
CTGTTGTCGG TCGGCGTCGG GTTGACGCTG GGCAATTTCC TAGGCGGGCG CCTGGCCGAT
TGGAATCTGG CGCGCGCCCT GGCGCTGATC GCCGTCTCCA TCGCCGTGGT GTCCCTGGCT
CTGCGCTGGA CGAGCCCCTA CCTGATCCCG GCCCAGATCA ACTGGTTCCT GTGGGGGGCA
GCGACGTTCG CAGCCATCCC CGCTTCCCAG GTCAACGTGA TGCGGTTTGG TCAGGCCGCG
CCAAACCTGG TCTCGACCCT CAACATCTCG GCCTTCAACA TCGGCATCGC CACAGGCGCT
TGGATCGGCG GCACGGTCCT GAGCGTCAGT CACAACCTGC TGGGCATTCC GGTGGCGGCG
GCGGTCGTGG CGGTGCTGGC GTGGATCGCC GTGCTGGCCG CGGGGCGCCT ACGCTAG
 
Protein sequence
MPLAVLILTL STFALGTSEF VIMGLLPGVA RDLDVSIPAA GWIVTAYALG IALGGPIMAL 
ATARMPRKRA LLVLMGLFVL GNALCALSPN YSLLLLARVV TAMGQGSFFG IGAVLAASLV
PDHRKATAIA TMFAGLTLAN VAGVPLGTAL GNWAGWRAPF WAITAFGLLA LVGLAAILPL
RRDEEHADFI AEFRALSDGR IWAALGTTVL FTACAFPLFT YIVPMLEDVT GVSAAGVTIS
LLSVGVGLTL GNFLGGRLAD WNLARALALI AVSIAVVSLA LRWTSPYLIP AQINWFLWGA
ATFAAIPASQ VNVMRFGQAA PNLVSTLNIS AFNIGIATGA WIGGTVLSVS HNLLGIPVAA
AVVAVLAWIA VLAAGRLR