Gene Caul_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5087 
Symbol 
ID5897413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp7657 
End bp8247 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content70% 
IMG OID641555190 
ProductTetR family transcriptional regulator 
Protein accessionYP_001676521 
Protein GI167621736 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.305126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.842071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTGT CCAGGGCCCA GGCCGAGGAA AGCCGCGAGC GGATCTTGCG GGAGGCCGGT 
CGGCTCTTTC GGGAGAAGGG GTTCGACGGC GTGGGCGTCA GCGAATTGAT GCAGGCCGCG
GGCCTGACCA ATGGCGCGTT TTACACCCAC TTTGACTCCA AGGACGACCT GATCGCCAAA
ACTTGCGAGC GTGTCCTCGC GGGAAGCCGC GACCCATGGG CGGCGCTTGA GCGCGAGGAT
TTGTCCTTGC CGGAGTTCAT GGACGATTAC CTGTCGCCCG CTCACGCTCG GGCGCGCGGC
GAGGGCTGCA CCTTCGCGGC CTTGGGCGGA GACGTGGCGC GTCAGCGGCC GGCTGCGCGG
CAGGCCTTCA GCGACACGCT GCGCGCCAGC CTGACGGCGC TGGAGCCAAG ATTGCGAGGC
GAGGGCGACC CTACGCCGCG GCAGGAGGCG ATCTTCACCC TGGCGGCGAT GGCCGGCGCG
TTGATGCTGG CGCGCGCCGT CGACGATCCG GCGCTGTCGC GCGAGCTACT CGACACGGTC
CGCGCCCGGC TTGTGGAGGA CGCGGCCGGC GATGCGGTAT CTCGCGACTG A
 
Protein sequence
MRVSRAQAEE SRERILREAG RLFREKGFDG VGVSELMQAA GLTNGAFYTH FDSKDDLIAK 
TCERVLAGSR DPWAALERED LSLPEFMDDY LSPAHARARG EGCTFAALGG DVARQRPAAR
QAFSDTLRAS LTALEPRLRG EGDPTPRQEA IFTLAAMAGA LMLARAVDDP ALSRELLDTV
RARLVEDAAG DAVSRD