Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5403 |
Symbol | |
ID | 5897187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | - |
Start bp | 118760 |
End bp | 120373 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550693 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001672179 |
Protein GI | 167621671 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAGA CTGAGGCCCT CTTTGCTCGC TATGGGTCGA TGTACCGCTG GCTCGCGACG GCGGCGGCCA TGGTTTCAGC GATCGCCGTG GTGTTGTCAT CCACCATTGT GAACGTGGCT GTCCCGGCGA TCATGGGGCA GTTCGGCATC GATCAGACCC GGGTGCAGTG GCTCGCGACT GGTTTCCTCG CCGCGATGAC GGTCACCATG CTGCTCTCTG CATGGTGCGA GCGCACCTTC GGTCAGCGGC AAACCATGAT GGTGGCCCTG GGCGTGTTCC TGTTCGGATC GGTCCTTGGC GGGCTGGCCC CGGATGATAC GGTGCTCATA GTCTCCCGGG TGATCCAGGG CGCTGCAGCG GGTGTCATCC AGCCGCTGGC GATGGTCGTG ATGTTCCAGG TGTTTCCCCC CGACAAGCGC GGCGCGGCTA TGGGCATCTT CGGGATTGGC GTGGTGCTCG CCCCGGCGCT GGGGCCGTGG GTCGGCGGAC TGCTGATGGA TAGCTTCGAC TGGCGGTTCC TTTTCTATTT GGGGATTCCC TTCGGCCTCG GCGGCATCAC GCTGGCGAAC CTTTTCCTGC CCGATCGCGA TCCTGCGGCT GCGAAGGCCC GACTGGACTG GCCGGCCCTG GTGTGGCTCA GCGTGGCGCT GCTCGCGTTG CTGGAAACCA TGTCCAGTGG ACAGCGCCAG GGCTGGGCCT CCACGCCCGT CCTCGCGGGG TTTGCGATCA CGATGACCTG CGCGGCGGCC TTTCTTGTCC GCGAAAGTCG GATTCCGCAT CCGCTGCTCG ACCTGCGGGT GTTCGCCAGT CCCCCCTTCG CTGCGGCCGC AGCGGTCAGC TTTGTGCTGG GGGCCGGACT GTACGGCACG ACCTATCTGC TCCCGGTCTT CGTCCAGCAG ATTCAAAACT TCACCCCAAC CCAAGCGGGT CTGCTGCTGA TGCCGGCCGG CTTCGTCCTG GTCATCGTCT TTCCCGCCGC GGGCATGATG AGCGACCGGC TGTCGCCAGG ATTGCTGATC GGGGCGGGCA TGGCGATTTT TGCCTATTCG TCGTGGCTAA CGGCCCACGT GAGCGCCGAC ACAGCCTTCT GGACGCTCGC TTGGTGGACG GTGATTGGCC GCATTGGCAT GGGCTTTGTG TTCCCCTCGC TGAGTTCTGC AGCTCTCAAG GTGCTGCCGC TGGAACTGTT ATCCCAGGGC TCAGGCTCGA TGAACTTCAC CCGGCAATTG GGCGGAGCGC TTGGCACGAG TATTCTGGGC GTTATCATTG AGCGACGAAC CGCGTTCCAC GGCGACGCCC TCGCCGCGAC CCAAACGTCG GATAATTCGA CTACAGGCAA CTATCTCATG GAAGCCGCGC GAACCGTCCA CGCGATGGGA CTCGGGCCTT TGGAGCAACT CCCGGCCGCC GGCTGGTTGC TGGGGCAAGG AGTTTACTAC CAGGCGGCGG CGGCCGCCTA CCGAGACGGG TTCCTGATCA CGGCTATGGT CTTCGCTGCG GCCCTCGCGC CGACGTTCGT TCTTCATCGT GCTTTGAGCC GCGTCGCGGG GCGATCCCTG ACAGGATCCG GTTCGGCTTC GGGGGGCGAG GCCTCGCGGG CGACGAAGGT ATAA
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Protein sequence | MPQTEALFAR YGSMYRWLAT AAAMVSAIAV VLSSTIVNVA VPAIMGQFGI DQTRVQWLAT GFLAAMTVTM LLSAWCERTF GQRQTMMVAL GVFLFGSVLG GLAPDDTVLI VSRVIQGAAA GVIQPLAMVV MFQVFPPDKR GAAMGIFGIG VVLAPALGPW VGGLLMDSFD WRFLFYLGIP FGLGGITLAN LFLPDRDPAA AKARLDWPAL VWLSVALLAL LETMSSGQRQ GWASTPVLAG FAITMTCAAA FLVRESRIPH PLLDLRVFAS PPFAAAAAVS FVLGAGLYGT TYLLPVFVQQ IQNFTPTQAG LLLMPAGFVL VIVFPAAGMM SDRLSPGLLI GAGMAIFAYS SWLTAHVSAD TAFWTLAWWT VIGRIGMGFV FPSLSSAALK VLPLELLSQG SGSMNFTRQL GGALGTSILG VIIERRTAFH GDALAATQTS DNSTTGNYLM EAARTVHAMG LGPLEQLPAA GWLLGQGVYY QAAAAAYRDG FLITAMVFAA ALAPTFVLHR ALSRVAGRSL TGSGSASGGE ASRATKV
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