Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5396 |
Symbol | |
ID | 5897195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | - |
Start bp | 106916 |
End bp | 109432 |
Gene Length | 2517 bp |
Protein Length | 838 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550686 |
Product | TonB-dependent receptor |
Protein accession | YP_001672172 |
Protein GI | 167621664 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTTA CCCAGGTGCT TTGCGGCACG GCGTCCGCAG CCGTGCTCGC CGGTCTGTCC GTCGCGAGTG TCGCGCAGGC CCAACAAACC GAAACGATGA CCGTCGACAG CATCGTCGTC ACCGCCCAGA AGCGCGAGCA GAACCTGCAG GACGTGCCGG TCGTGGTCAC CGCCGTCGGC GCCAAGCTGC TGCAAGACAC CGGCGTCAAG GACATCAAGG ATCTGACGAT CCTGACCCCC GGTCTGACCG TCACCTCGAC CACGTCGGAA GCCTCGACCA CCGCCCGCGT GCGCGGCGTC GGCACGGTCG GCGACAACCC CGGTCTGGAA AGCTCGGTCG GTGTCGTGAT CGACGGCGTC TATCGTCCCC GCAACGGCGT CTCGTTCGGC GACCTGGGCG AAATGGACCG CATCGAAGTC CTGAAGGGTC CGCAAGGCAC TCTGTTTGGC AAGAACACCT CGGCCGGCGT CATCAACATC GTGACCAAGG AGCCCGAGTT CGGCTTCGGC GCCGCCGCTG AAGCCACCCT CGGCAACTTC AACGCCCACG GCCTGTCGGC CTCGGTGACC GGTCCGCTGT TTGGCACCGA GACCCTGGCC GGCCGCCTCT ATGTTGCCGC CCGAGAGCGC GACGGCTACA ATGATGTTCT GACCGGCAAG GGTCCCAGCA AGCGCGACCA GGACCAGGAC CAGGGCTTCT ACACGATCCG TGGCCAGCTC CTGTTCGTGC CCAATGATGA AGCCACCTTC AAGCTTATCG GCGACTACAC CAAGCGCGAC GAGAACTGCT GCGGCGCCGT GCAGATCCGC ACCGGCCCGA CCGCGCCGAT CCTGAACGCC CTGGCCGGCG GCGTCGCCTT GGCCCCGACC GCCAAGCCCT ATGATCGCGT CGCCTATTCC AACCGTGGCG CGCCCTCGTC CATCGAGGAC AAGGGCATCT CGCTGGAAGG CAATATCGAA CTGCCGATCG GCGAACTGAC TTCGATCACC GCCATCCGCA ACTGGCGCAC CGACAACGGT CAGGACAGCG ATTTCTCGAC GGCTGACCTT GCCTATCGCA ACAAGGACGG CACCAACTAC AGCGAGTTCA CGACCTACAC CCAGGAACTG CGCCTGGCTG GCAAGACCGG CAATCTGGAT TGGCTGGTCG GCACGTTCCT GGCGGACGAG CGACTGGATA ACAAGGCCAA CTTCCTCTAT GGCAATGACT ACGAGCAGTA TCTGGGCCGC CTGCTGTCGC GCTCGGCGGC CAACCCTGCC GGCATCGGTA ACTTCATCTC GCTGCTGACC GGTCGCGCGC CGAACACCAC CTTCACGCCA GGCCAGGGCC TGTACGACAA GTACAATCAG CGCGCCAAGA CCATCGCGCT GTTCACCAGC AACACCTACC AGTTCACCGA CGCCTTCAGC ATCACCGCCG GTCTGCGCTA CAGCATCGAC AAGAAGGACT TGGACACCTA CCAGACCACG TCCGATGGCG GCGTCGGCTG CGGCATCGGC CTGTCCACCG CTGGTCAGGC CCGCATCGCC GGCATCGTGG GCGCAGCGGC CACCCCGACC GTGGTCGGCA ACCTCTGCCT TCCCTGGGCC AACCCGCTGT TCAACGGTCG CGGCACCCAC CAGAAGCGCA CCGACAAGGA ATGGTCGGGC ACCATCAAGG CCGCCTATCG CTTCTCGCCG GAAGTGTTCA GCTACGCCTC TTATGCGCGC GGCTACAAGG GTGGCGGTTT CAACCTGGAC CGCACCCAGT CGTCGAACGG CCTGCAAAGC GGCGGTCTGG GCGTCGTGCC GATCTACGAC ACCTCGTTCG AGGGCGAGTT TGTCGACAGC TACGAAATCG GCCTCAAGAA CACCCTGTTC AACCGCTCGG TCCTGCTGAA CCTGACGGGC TTCTATCAGA AGTTCACCGA CTTCCAGCTG AACACCTTCC TGGGCACCTC GTTCGCCGTG GCTTCGATCC CGGAAGTAAC CTCGCAGGGC GTCGACGCCG ACTTCCTGTG GTTCACCCCG GTGCGCGGCC TGACCGTCCA GAGCGGCTTC ACCTACGCCA AGACCGAATA CGGCAACCAG AAGATCCCCA ACGATTCGAC CAACGCCCTG GCCCTGCTGC CTGGTCAACG TCTGTCGCTG GCGCCGGAAT ATTCGGCCTC GGGTTCGCTG ACCTATGAGC GTCCGGTGGG CGACAGCTAC AAGGCCCGCT TCAATGTCGG CGCCAAGTAC TCGTCGGAAT ACAACAGCGG TTCCGACCTG TTCCCGCCGA AGTTGCAAGA GTCCTACACG GTCGTGAACG CCCGCATCGG CGTCGGCACT GCGGATGACG CCTGGACCGT CGAACTCTGG GGCCAAAACC TGTTCGACGA GGAATATACC CAGGTGGGCT TCAACGCCTT CCTGCAAGGC TCGTCGGGGC TCAGTGCCAC CCAGGCAACT TATGTGCCGG CCAATGACAC GATTACCTAT GACGCCTTCC TCGGCGCGCC GCGCACCTAC GGCGTGACGC TGAGGGCTAA GTTCTAA
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Protein sequence | MRFTQVLCGT ASAAVLAGLS VASVAQAQQT ETMTVDSIVV TAQKREQNLQ DVPVVVTAVG AKLLQDTGVK DIKDLTILTP GLTVTSTTSE ASTTARVRGV GTVGDNPGLE SSVGVVIDGV YRPRNGVSFG DLGEMDRIEV LKGPQGTLFG KNTSAGVINI VTKEPEFGFG AAAEATLGNF NAHGLSASVT GPLFGTETLA GRLYVAARER DGYNDVLTGK GPSKRDQDQD QGFYTIRGQL LFVPNDEATF KLIGDYTKRD ENCCGAVQIR TGPTAPILNA LAGGVALAPT AKPYDRVAYS NRGAPSSIED KGISLEGNIE LPIGELTSIT AIRNWRTDNG QDSDFSTADL AYRNKDGTNY SEFTTYTQEL RLAGKTGNLD WLVGTFLADE RLDNKANFLY GNDYEQYLGR LLSRSAANPA GIGNFISLLT GRAPNTTFTP GQGLYDKYNQ RAKTIALFTS NTYQFTDAFS ITAGLRYSID KKDLDTYQTT SDGGVGCGIG LSTAGQARIA GIVGAAATPT VVGNLCLPWA NPLFNGRGTH QKRTDKEWSG TIKAAYRFSP EVFSYASYAR GYKGGGFNLD RTQSSNGLQS GGLGVVPIYD TSFEGEFVDS YEIGLKNTLF NRSVLLNLTG FYQKFTDFQL NTFLGTSFAV ASIPEVTSQG VDADFLWFTP VRGLTVQSGF TYAKTEYGNQ KIPNDSTNAL ALLPGQRLSL APEYSASGSL TYERPVGDSY KARFNVGAKY SSEYNSGSDL FPPKLQESYT VVNARIGVGT ADDAWTVELW GQNLFDEEYT QVGFNAFLQG SSGLSATQAT YVPANDTITY DAFLGAPRTY GVTLRAKF
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