| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5385 |
|---|
| Symbol | |
|---|
| ID | 5897216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010333 |
|---|
| Strand | - |
|---|
| Start bp | 96706 |
|---|
| End bp | 97254 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641550675 |
|---|
| Product | ATP-dependent transcription regulator LuxR |
|---|
| Protein accession | YP_001672161 |
|---|
| Protein GI | 167621653 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.983573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGCACG ATCCGGAAGG TTCCACCTCG CTAACCGACT TGCGAACGTT GCTTTGGACC
ACGCACGACG CTTCGAACTG GGTAGACTCG AGATTTCCGC GCTGCTCTGC ACCGCCCTTT
GCCTACGCAG GGACAGAAAG GCCGACCATC GCCGAGCAGC GTGCGGCAGA TGCGGTCGAT
ATCGCCTCCC GCTCCGGGTG TTATCGCACG TTGCTTGATG AGCGGGAGTT TCTAGAGGCA
TTCGGGTCGA TCTCGGCGCC GCTGTTGAAC CTAGTTCCGT CCGAGTCGGA ATTGGGGCAC
CGGGAGCTCG GGCCGGGCGA CCGTAACGTT CGTTCGCCAA GCGGCGAGAT TTCTATTGTT
CTTACAAGGA AGGAACTAGC GATGATTCAA AGAATCAAAG AAGGATTCTC AAATCGTGAT
ATAGCTGAGA AGCATCGTAT AAGTGAGGAC ACTGTTAAAT GGCATATTCG CAATATATTT
TCGAAGCTAC AAGTCAAGAA CAGGGTTCAA GCGCTTCTAA AAGCTGAACA GATCGGCATC
CTGCGGTGA
|
|---|
| Protein sequence | MQHDPEGSTS LTDLRTLLWT THDASNWVDS RFPRCSAPPF AYAGTERPTI AEQRAADAVD
IASRSGCYRT LLDEREFLEA FGSISAPLLN LVPSESELGH RELGPGDRNV RSPSGEISIV
LTRKELAMIQ RIKEGFSNRD IAEKHRISED TVKWHIRNIF SKLQVKNRVQ ALLKAEQIGI
LR
|
|---|
| |