| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5379 |
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| Symbol | |
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| ID | 5897112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010333 |
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| Strand | - |
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| Start bp | 88389 |
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| End bp | 89837 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550669 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001672155 |
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| Protein GI | 167621647 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.320478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.694464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGC GCACCTATTG GCTCTTCGCC CTGCTTCCTG TGCTGTCCGC CTGCACGGTC
GGTCCCGACT ATGTCGGCCC ACCGGACAAG GGGATTTCAT CCCGCTTCGT GCGCATGGAG
GACACCGCCG TCATCGCAAC GCCTCTCGTT GCCCGGTGGT GGGAGACGCT GGATGACCCT
ATCCTTGACG GAATTGAAGA GCGGGCGCTG CGTGCAAATC CGAACATGGC GGCTTCCCAG
GCTCGGTTGC GTCAAGCGCG CGCCATGCTG CGCATCGAGC GAGCCAACGC GGCGCCGAAC
GTCGCCGCCG GTGCGCTGGC TGGCCATGGC CGCGTGCCGG AGAGCGGCTC CGGCGCTGCA
GGCGCCATGA TACCGGCTCT GGTCGGAACC GACGAGAGAT CCTTCGATCT ATATACCGCC
GCCTTCGACG CCAGTTGGGA GATCGATCTG TTCGGCGGGC GTCGGCGCGG AGTCGAAGCC
GCAACGGCTA CCGCGCAAGC CGCAGAGGCC ACACTGGCCG ACGCGCAGGT GAGCCTGACC
GCCGAGGTCG CCCATGCCTA TATCGGCCTT CGCGACACAC AGAAGCGGAT CGTATTGGCG
AAGCGGTCGG TGGAACTCCA GCAGCAGATG CTCGACCTCA CGCGCCAGCA GTTCGAAAGG
GGCGTCGCTT CCGCGCTCGA TGTCGAACGG CTCAGCATGC AATTTGAGAA CACCAATGCC
AGGGTGGCTC CACTCGTGGC CCAGGCCGAG GGCTTTATGA ACGCCCTCGC CTGGCTCTGC
GGAGAGCAGC CCGGCGCCCT TGATGCAATA CTCGATCCGC CCCGGCCAGC GCCACTGCCC
CCCCCTGCCG TTGCCATCGG CGATCCGGAA GCCATGCTCA GGCGGAGGCC CGACGTGCGT
GCCGCTGAAC GCCGGCTCGC GGCCGATACC GCCCGTATCG GGGTGGCGGA AGCCGCCAGG
TTCCCGCGGC TCAGTTGGAT GGGCGTCATC GGGATCGGCG GTACTCAACC TTCCGACTTG
ACGCATCTCG ATGATTTCGT CGCACTGGGG GCACCGACGT TGCAGTGGAG CGTGCTGAAT
TTTGGTCGCG TGCAAGGGCA GATCAGGCAG CGCGAGTCGG CGCGAGACGA AGCCGAAGCC
CTGTATGACG CGGCGGTCCT CGGGGCATTA CGAGACACGG AAGACGCGTT GGCGCGGTTC
CGAGCCGGTC GTGCAACCGT CGCGATTCTC GCGCGGGCGA AGGCGTCGGC CGATCGGTCA
GCCAATTTGA CGCAGCAGAA CTACCGAGCC GGCAGGGCAT CGCTCATCGA TGCGCTCGGC
GCAGAGCGAC ATCGGATCGA TGCTGAGGAC GGTCTCTCCG CGGCCACGGC CGGTTTGACG
GCAGACTATG TTGCGCTTCA GAAGGCGCTG GGCCTCGGAT GGCTCGACGG GGGAGTATCT
GCCGGCTGA
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| Protein sequence | MPMRTYWLFA LLPVLSACTV GPDYVGPPDK GISSRFVRME DTAVIATPLV ARWWETLDDP
ILDGIEERAL RANPNMAASQ ARLRQARAML RIERANAAPN VAAGALAGHG RVPESGSGAA
GAMIPALVGT DERSFDLYTA AFDASWEIDL FGGRRRGVEA ATATAQAAEA TLADAQVSLT
AEVAHAYIGL RDTQKRIVLA KRSVELQQQM LDLTRQQFER GVASALDVER LSMQFENTNA
RVAPLVAQAE GFMNALAWLC GEQPGALDAI LDPPRPAPLP PPAVAIGDPE AMLRRRPDVR
AAERRLAADT ARIGVAEAAR FPRLSWMGVI GIGGTQPSDL THLDDFVALG APTLQWSVLN
FGRVQGQIRQ RESARDEAEA LYDAAVLGAL RDTEDALARF RAGRATVAIL ARAKASADRS
ANLTQQNYRA GRASLIDALG AERHRIDAED GLSAATAGLT ADYVALQKAL GLGWLDGGVS
AG
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