Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5374 |
Symbol | |
ID | 5897081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | - |
Start bp | 86140 |
End bp | 86496 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550666 |
Product | conjugal transfer protein TrbC |
Protein accession | YP_001672152 |
Protein GI | 167621644 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.18687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGA TCCGAAATGT CTCGTCCGCG CCGCATCGCT TTGGGCGAGC CGCCCACTCC GCAATACTCA CCGTCGGCGT CGGCCTACTT CTGGCCACTC CAGCTTGGGC TGGTGGCGGC GGCACCGCCA TGCCCTGGGA GGGCCCGCTT ACCACGGTGA TGCAGTCGCT CTCCGGTCCT GTCGCCAAGG CAATTGGCAT CATCGCCATC GTCTTGGCCG GACTGGGCTT TGCCTTCGCC GAGGGCGGCT CGGCCATGCG AAAGGGCATC GGCATCGTCT TTGGGCTGGC CATCGCCTTC ACCGCCACGA CCTTCGTCAG CACCTTCTTC AACCTCACCG CCGGCGCGGC GTTCTGA
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Protein sequence | MNLIRNVSSA PHRFGRAAHS AILTVGVGLL LATPAWAGGG GTAMPWEGPL TTVMQSLSGP VAKAIGIIAI VLAGLGFAFA EGGSAMRKGI GIVFGLAIAF TATTFVSTFF NLTAGAAF
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