Gene Caul_5373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5373 
Symbol 
ID5897234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp85872 
End bp86138 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content67% 
IMG OID641550665 
Producttype IV secretory pathway VirB3 family protein 
Protein accessionYP_001672151 
Protein GI167621643 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5268] Type IV secretory pathway, TrbD component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0987094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGT CGCAAGTCGA GGGCTTCGAG ATCGCCTTCC ACAGCTCCCT TTCGGAGCCG 
GTCACGATCG CCGGCGTGCC GCGAATGATC GCCGTGCTGA ACGGCACGCT TACGGCGGTC
CTGGCGCTGG GCCTCCAGGT CCCCTTGATC GGCATCCCAT TCGGCCTAGC CATCCACGGC
GCCTGCTACT GGCTGGCCAA GCGCGACCCT TACTTCTTCG ACGCCCTCGG GCGGCACATC
CGCCAACGGC CCTACCTGGA CGCCTGA
 
Protein sequence
MAQSQVEGFE IAFHSSLSEP VTIAGVPRMI AVLNGTLTAV LALGLQVPLI GIPFGLAIHG 
ACYWLAKRDP YFFDALGRHI RQRPYLDA