| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5372 |
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| Symbol | |
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| ID | 5897243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010333 |
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| Strand | - |
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| Start bp | 83300 |
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| End bp | 85774 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550664 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001672150 |
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| Protein GI | 167621642 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.259729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTACC TGCGCGAATA CCGTCCCAAG GCTGATCGCC TGTTCGATCA TTTGCCTTGG
GTGGCTCTGA TCGGGCCGGG CCTGATCCTC AACAAGGATG GCAGCTTTCA GAAAACCTTG
GCCTTCCGGG GTCCCGATCT GGCCAGCTCG ACGGACGCCG GCCTAGTCGC TACCCGCGCC
CAACTGAATA ACGCCCTTCG CCGCCTGGGC TCGCGCTGGT GCCTGCACAT CGAGGCGCTG
CGAGCGGCCT CGCAGGATTA CCCGGCCAGC CAGTTTCCCG ATCTCGTCTC CGACCTGGTC
GACGAGGAGC GCCGCGAGGC GTTTGAGGGT CACGAGCGGC ACTTCGAGAG TCGCTACTTC
CTGACCTTCA CCTACCTCCC GCCCGAGGAA GCGGTCAGCA CGGCCGAGAG CCTGCTGCTG
GAGAACGCGC CTTCAGGGCG CGGCGCCGCC GGCATGTACC GCGCGGCCCT GAGCGATTTC
CTCAGCACGG TGCGCCAGAT CGCCGACATC CTGACCGCGG TCATGCCGGA GGTTCACGAA
CTCTCCGACG ATGAGACGCT CACCTATCTG CATGGCTGCA TCTCCACCAA GCGCCACTAC
GTCAAGGCGC CGGAGACCCC GGCCTATCTC GATGCTTTCC TGACGGATGA CGATTTCCAG
GGCGGCCTGC TGCCGCGCCT GGGCGCCAGC TTTGTGCGGA CCATCTCGGT GCGCGCCTAT
CCGGCGACCT CTTCGCCGGG CCTGTTGGAC CGCCTGAACG AGCTGGGCAT CAGCTACCGC
TGGGTTTGCC GATTCCTGCC GCTCGACAAG GAGGACGCCC GCAAAGCCGT GACTACGGTC
CGCAAGCGCT GGTTCGCCAA GCGCAAGGGC GTCATGGCGC TGCTGAAGGA GGCCATCACC
CGGGAGCCTT CAGTGCTGGA GGATCCAGAC GCCGCGGCCA AGTCGATGGA CGCCGATGCG
GCGCTGGCCA TCCTCGGTGG CGACTACGCC TCGATCGGCT ATTTCACGCC GACCGTGACC
TTGATGGACA CCGATCCCGA CCGGCTGGCC GACCGGGTCC GCGAGGTCGA AAGCGCCATC
AACCGGGTCG GCTTCGTCTG CAAGGTCGAG GACGTCAACG CCGTCGAGGC CTGGATCGGC
AGCTTGCCCG GCCAGGCCTA CGCCGATCTG CGGCGGCCCT TGGTGTCGTC GCTGAACCTT
TGCGACATGA TGCCGATGTC GGCCATCTGG CCTGGCCCGA CGCGCAATGA GCACCTTGGG
TCCGAGTGCG CCAAGCGTGG CCACCCCGGC GCCCAGCCGC CGTTGATGTT TACCCGCACG
GCTGGGACAA CGCCGTTCCG CTTCGATCTG CATCAGGGTG ACGTCGGCCA CACGATGATC
GTCGGCCCCA CGGGCGCCGG CAAATCTGTG CTGCTGAACG CCATCGCGGT GCAGTGGCTC
CGCTATCCCG AGGCGCAGGT CTTCTTCTTC GACAAGGGCG CCAGCTCGCG CGCCGCCACC
CTGCTGACCG GCGGCCAGTT CTACGCCCTG GGCAGCGAGG AAAGTGAGCT CGCCTTCCAG
CCGTTGGCCG ACATCGACAC CGCCGATGAT CGGTCGTGGA CCCAGGAGTG GGTGCAGGAT
CTCGTGGCGG CCGAGGGCGT GGAGATCACC CCTCAGGTCA AGGAAGAGAT CTGGAGCGGT
CTGCGTAATC TCGCCGCCGG CCCTCGCGAC CAGCGGACCC TGACCCTGCT GGCGGCGACC
ATTCAGGACC ACAGCGTCAA GGCGGCGCTC AAGCCTTTCA CCCTGAGCGG ACCCCACGGG
CATCTCCTCG ACGCCAGCCA GAACACGCTC AAGGCCGGCA CCTGGCAGAC CTTCGAGATG
GCAGAGCTGA TGGGCAACAA GTCCGCCCTG GCCCCCGTCC TGACCTATAT CTTCCGCACC
CTGGAGAAGC GGTTCGACGG TCGGCCGACC CTGCTCATTC TCGATGAAGC GTGGCTGTTC
CTCGACCAGG GCTCGTTCGC GGCGAAGATC CGCGAGTGGC TGAAGACCCT GCGGAAGTTC
AATGTCGCGG TCGTGTTCGC CACGCAGAGC CTGGCCGATA TCGCCAGATC CTCGATCGCT
CCGGCGCTGA TCGAGAGCTG CCCAACCCGG GTCTTCCTGC CCAATCCGGA CGCCCAGACG
CCGCAGATCG CCGAGCTTTA CCAGGGCTTT GGGCTCAATC CCCAGCAGAT CCGGATCATC
GCCAACGCCA CGCCCAAGCG CGAATATTAC TACCAGTCGA TGTCGGGCAA CCGGCTGTTC
GAGCTGGGCC TTGGTCCCTT CTCCCTCGCG GTCGTGGGAT CCTCGTCGCC TGGGGACCAG
CAGCTCATGA CCCGGTTGCT GGCCGAGCAC GGCGCGGCGC AATTCTGCGA ACGGTTCTTC
GCCGCCAAGG GCCAGGCGGC CGTGGCCAGC TACCTTGCAG CCCAGCGTGA CGCCGCCCAT
CCGAAGGTGG CGTGA
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| Protein sequence | MLYLREYRPK ADRLFDHLPW VALIGPGLIL NKDGSFQKTL AFRGPDLASS TDAGLVATRA
QLNNALRRLG SRWCLHIEAL RAASQDYPAS QFPDLVSDLV DEERREAFEG HERHFESRYF
LTFTYLPPEE AVSTAESLLL ENAPSGRGAA GMYRAALSDF LSTVRQIADI LTAVMPEVHE
LSDDETLTYL HGCISTKRHY VKAPETPAYL DAFLTDDDFQ GGLLPRLGAS FVRTISVRAY
PATSSPGLLD RLNELGISYR WVCRFLPLDK EDARKAVTTV RKRWFAKRKG VMALLKEAIT
REPSVLEDPD AAAKSMDADA ALAILGGDYA SIGYFTPTVT LMDTDPDRLA DRVREVESAI
NRVGFVCKVE DVNAVEAWIG SLPGQAYADL RRPLVSSLNL CDMMPMSAIW PGPTRNEHLG
SECAKRGHPG AQPPLMFTRT AGTTPFRFDL HQGDVGHTMI VGPTGAGKSV LLNAIAVQWL
RYPEAQVFFF DKGASSRAAT LLTGGQFYAL GSEESELAFQ PLADIDTADD RSWTQEWVQD
LVAAEGVEIT PQVKEEIWSG LRNLAAGPRD QRTLTLLAAT IQDHSVKAAL KPFTLSGPHG
HLLDASQNTL KAGTWQTFEM AELMGNKSAL APVLTYIFRT LEKRFDGRPT LLILDEAWLF
LDQGSFAAKI REWLKTLRKF NVAVVFATQS LADIARSSIA PALIESCPTR VFLPNPDAQT
PQIAELYQGF GLNPQQIRII ANATPKREYY YQSMSGNRLF ELGLGPFSLA VVGSSSPGDQ
QLMTRLLAEH GAAQFCERFF AAKGQAAVAS YLAAQRDAAH PKVA
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