Gene Caul_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5338 
Symbol 
ID5897143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010333 
Strand
Start bp48876 
End bp49841 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID641550630 
Productplasmid replication initiator protein-like protein 
Protein accessionYP_001672116 
Protein GI167621608 
COG category[L] Replication, recombination and repair 
COG ID[COG5534] Plasmid replication initiator protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.522941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGC GTACGATTCG ACAGCAGGAA TTTGATCTGT TCGTCCCCCG GATGAACAGC 
CTGCCGCTGA AGGATCAGCG CGAGGTTATG GAGCGGCCGT TCTTCTCGCT GTCGAAGCGT
AAGCGCCTGA AGCCGATTGA ATACACCAGC CCCGATGGTG AGGTCTGGGT CCACGTCAGC
GCCAACCCCG CTTTCGGCAT CGCCACCATC TGGGACGCCG ACATCCTGAT CTGGGCGACC
TCACGCATCA ACCAGATGCG AGAGGCCGGC GAAAACGACC TGCCCCGAAC CTTGCACACT
ACGACCTATG ATCTGCTCAA GGCGATCAAG CGCGACACGG GCGGCAAGGG TTATCGAGAA
CTCCAGGCCG CTCTTCAGCG ACTGGAGGCC ACGACGATTC AGACCTCGAT TCGAGGGACC
AAACGCAACA CCAAGGCGCA ATTCGGCTGG CTCGACGAAT GGATACTGGA GTCGGACGCG
GTGACCGGAG CCCCGAAAGG CCTGACACTC ACCTTGTCCA ACTGGGTCTA TGAAGGGGTC
ATCAAGGACC GGTCGCTGCT GACCCTGCAC GCCGACTACT TCGCCCTCTC CGGCGGTGTT
GAGCGCGCCA TCTATCGGAT CGCCCGCAAG CACGCCGGCG ACCAGGCGTC GGGCTGGACG
TGCCGTGTGA GCGTGCTGCA CGACAAGACC GGCAGCGAAA GTCCGCTGAA ACAGTTCAAC
TACCTGCTCA AGCGGATTGT CGCCGCCAAC GACCTGCCCG AATACGACGC AAGTTTCGTC
AACGCCGCGG ACAATTCGCC GGCCGTCCAT TTCATCCGCC GCGACGCTGC GGAACGCGCC
GCGATCAAGG CAGATCTGGC GCGCCTAGCC GCCAATTCGG AGCGCCGGAC CCGTGAGGAC
GCCCGTACGC TTGCCGTTGA TGGCTTGTTC GAAAAGCGAA AGGTCAAGCC CTCGGGGGAA
CGGTGA
 
Protein sequence
MSKRTIRQQE FDLFVPRMNS LPLKDQREVM ERPFFSLSKR KRLKPIEYTS PDGEVWVHVS 
ANPAFGIATI WDADILIWAT SRINQMREAG ENDLPRTLHT TTYDLLKAIK RDTGGKGYRE
LQAALQRLEA TTIQTSIRGT KRNTKAQFGW LDEWILESDA VTGAPKGLTL TLSNWVYEGV
IKDRSLLTLH ADYFALSGGV ERAIYRIARK HAGDQASGWT CRVSVLHDKT GSESPLKQFN
YLLKRIVAAN DLPEYDASFV NAADNSPAVH FIRRDAAERA AIKADLARLA ANSERRTRED
ARTLAVDGLF EKRKVKPSGE R