Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_5338 |
Symbol | |
ID | 5897143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010333 |
Strand | - |
Start bp | 48876 |
End bp | 49841 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550630 |
Product | plasmid replication initiator protein-like protein |
Protein accession | YP_001672116 |
Protein GI | 167621608 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5534] Plasmid replication initiator protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.522941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGC GTACGATTCG ACAGCAGGAA TTTGATCTGT TCGTCCCCCG GATGAACAGC CTGCCGCTGA AGGATCAGCG CGAGGTTATG GAGCGGCCGT TCTTCTCGCT GTCGAAGCGT AAGCGCCTGA AGCCGATTGA ATACACCAGC CCCGATGGTG AGGTCTGGGT CCACGTCAGC GCCAACCCCG CTTTCGGCAT CGCCACCATC TGGGACGCCG ACATCCTGAT CTGGGCGACC TCACGCATCA ACCAGATGCG AGAGGCCGGC GAAAACGACC TGCCCCGAAC CTTGCACACT ACGACCTATG ATCTGCTCAA GGCGATCAAG CGCGACACGG GCGGCAAGGG TTATCGAGAA CTCCAGGCCG CTCTTCAGCG ACTGGAGGCC ACGACGATTC AGACCTCGAT TCGAGGGACC AAACGCAACA CCAAGGCGCA ATTCGGCTGG CTCGACGAAT GGATACTGGA GTCGGACGCG GTGACCGGAG CCCCGAAAGG CCTGACACTC ACCTTGTCCA ACTGGGTCTA TGAAGGGGTC ATCAAGGACC GGTCGCTGCT GACCCTGCAC GCCGACTACT TCGCCCTCTC CGGCGGTGTT GAGCGCGCCA TCTATCGGAT CGCCCGCAAG CACGCCGGCG ACCAGGCGTC GGGCTGGACG TGCCGTGTGA GCGTGCTGCA CGACAAGACC GGCAGCGAAA GTCCGCTGAA ACAGTTCAAC TACCTGCTCA AGCGGATTGT CGCCGCCAAC GACCTGCCCG AATACGACGC AAGTTTCGTC AACGCCGCGG ACAATTCGCC GGCCGTCCAT TTCATCCGCC GCGACGCTGC GGAACGCGCC GCGATCAAGG CAGATCTGGC GCGCCTAGCC GCCAATTCGG AGCGCCGGAC CCGTGAGGAC GCCCGTACGC TTGCCGTTGA TGGCTTGTTC GAAAAGCGAA AGGTCAAGCC CTCGGGGGAA CGGTGA
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Protein sequence | MSKRTIRQQE FDLFVPRMNS LPLKDQREVM ERPFFSLSKR KRLKPIEYTS PDGEVWVHVS ANPAFGIATI WDADILIWAT SRINQMREAG ENDLPRTLHT TTYDLLKAIK RDTGGKGYRE LQAALQRLEA TTIQTSIRGT KRNTKAQFGW LDEWILESDA VTGAPKGLTL TLSNWVYEGV IKDRSLLTLH ADYFALSGGV ERAIYRIARK HAGDQASGWT CRVSVLHDKT GSESPLKQFN YLLKRIVAAN DLPEYDASFV NAADNSPAVH FIRRDAAERA AIKADLARLA ANSERRTRED ARTLAVDGLF EKRKVKPSGE R
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